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Items: 8

1.

HIV-1 J-Lat 10.6 Nanopore MinION R9.4.1 and R10.3 sequencing

Project data type: Raw sequence reads
Scope:
Multispecies
Drexel University
Accession:
PRJNA812612
ID:
812612
2.

An integrated metagenome catalog reveals new insights into the murine gut microbiome

The integrated mouse gut metagenome catalog (iMGMC), comprising 4.6 million unique genes and 660 high-quality metagenome-assembled genomes (MAGs)  linked to reconstructed full-length 16S rRNA gene sequences

Project data type: Genome sequencing and assembly
Scope:
Monoisolate
HELMHOLTZ CENTRE FOR INFECTION RESEARCH
Accession:
PRJEB32890
ID:
548304
3.

The Msn2/4-like gene transcription factor Com2 (ORF YER130) is a key player of S. cerevisiae response and tolerance to sulphur dioxide

Organism:
Saccharomyces cerevisiae
Taxonomy:
Saccharomyces cerevisiae (brewer's yeast)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Universidade de Trás-os-Montes e Alto Douro
Accession:
PRJNA483481
ID:
483481
4.

JPEel Assembly 1.0

We have assembled the first version of Japanese eel genome as 1.06 Gb with 10,158 scaffolds, N50 over 1.4 Mb and coverage up to 122x from the blood of female yellow eel. By taking 1,211 scaffolds in length larger than 100Kb, these scaffolds can composite 92% of Japanese eel genome.

Project data type: Genome sequencing and assembly
Scope:
Monoisolate
INSTITUTE OF INFORMATION SCIENCE, Academia Sinica
Accession:
PRJEB25708
ID:
472926
5.

1,4-dioxane-degrading enrichment culture

SDIMO gene analysis of two 1,4-dioxane degrading consortia enriched from uncontaminated soils

Taxonomy:
1,4-dioxane-degrading enrichment culture
Project data type: Other
Scope:
Multiisolate
Department of Civil and Environmental Engineering, Rice University
Accession:
PRJNA382826
ID:
382826
6.

1,4-dioxane-degrading enrichment culture

Microbial community analyses of two 1,4-dioxane degrading consortia enriched from uncontaminated soils [16s rRNA]

Taxonomy:
1,4-dioxane-degrading enrichment culture
Project data type: Other
Scope:
Multiisolate
Department of Civil and Environmental Engineering, Rice University
Accession:
PRJNA382825
ID:
382825
7.

Mus musculus

Olfactomedin 4 deficiency promotes prostate neoplastic progression and is associated with upregulation of the hedgehog-signaling pathway

Taxonomy:
Mus musculus (house mouse)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Genomics Core Lab, GCL, NIDDK/NIH
Accession:
PRJNA172207
ID:
172207
8.

Homo sapiens

array-CGH on single blastomeres from day-4 human preimplantation fresh and frozen embryos

Taxonomy:
Homo sapiens (human)
Project data type: Variation
Scope:
Multiisolate
Research Group of Reproduction and Genetics, Research Group of Reproduction and Genetics, Vrije Universiteit Brussel
Accession:
PRJNA171590
ID:
171590

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