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1.

Distinct regulatory mechanisms by the nuclear Argonautes HRDE-1 and NRDE-3 in the soma of Caenorhabditis elegans.

Taxonomy:
Caenorhabditis elegans
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Csankovszki, Molecular, Cellular and Developmental Biology, University of Michigan
Accession:
PRJNA1160203
ID:
1160203
2.

Nuclear Argonaute protein NRDE-3 switches small RNA binding partners during embryogenesis coincident with the formation of SIMR granules

Taxonomy:
Caenorhabditis elegans
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Phillips, Biological Sciences, University of Southern California
Accession:
PRJNA1140655
ID:
1140655
3.

EDC-3 and EDC-4 Regulate Embryonic mRNA Clearance and Biomolecular Condensate Specialization

Taxonomy:
Caenorhabditis elegans
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Canadian Centre for Computational Genomics (C3G)
Accession:
PRJNA1140226
ID:
1140226
4.

Chamaecrista fasciculata cultivar:ISC 494698

Chamaecrista fasciculata ISC 494698 Transcriptome - C.f - 3

Taxonomy:
Chamaecrista fasciculata
Project data type: Transcriptome or Gene expression
Scope:
Monoisolate
DOE Joint Genome Institute
Accession:
PRJNA1136055
ID:
1136055
5.

A PWWP domain-containing protein Crf4-3 specifically modulates fungal azole susceptibility by regulating sterol C-14 demethylase ERG11

Taxonomy:
Neurospora crassa
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Institute of Microbiology, Chinese Academy of Sciences
Accession:
PRJNA1135472
ID:
1135472
6.

Serratia plymuthica strain:SWSY-3.47

Serratia plymuthica SWSY-3.47 Genome sequencing and assembly

Taxonomy:
Serratia plymuthica
Project data type: Genome sequencing and assembly
Scope:
Monoisolate
Keio University
Accession:
PRJNA1133236
ID:
1133236
7.

A comprehensive analysis of the effect of quorum-sensing molecule 3-oxo-C12-homoserine lactone on Candida auris and Candida albicans

Project data type: Transcriptome or Gene expression
Scope:
Multispecies
University of Debrecen
Accession:
PRJNA1132143
ID:
1132143
8.

Identification of targets for the transcription factor EFL-3 in the C. elegans epidermis

Taxonomy:
Caenorhabditis elegans
Project data type: Epigenomics
Scope:
Multiisolate
Life Sciences, Imperial College London
Accession:
PRJNA1129117
ID:
1129117
9.

lncRNA-ZFAS1, an emerging gate-keeper in DNA damage-dependent transcriptional regulation [H3.3 ChIP-Seq]

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Epigenomics
Scope:
Multiisolate
School of Basic Medical Science, Guangzhou medical university
Accession:
PRJNA1117386
ID:
1117386
10.

Single-nucleus Multiome ATAC and Gene Expression analysis of the liver tissues from matrin-3 floxed and liver-specific knockout mice

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Other
Scope:
Multiisolate
Beadle N157, Biochemistry, University of Nebraska - Lincoln
Accession:
PRJNA1111897
ID:
1111897
11.

Regulation mechanism of gibberellic acid-3 for astaxanthin biosynthesis in heterotrophically growing Chromochloris zofingiensis

Project data type: Raw sequence reads
Scope:
Multispecies
Institute of Hydrobiology
Accession:
PRJNA1105312
ID:
1105312
12.

A set of circulating microRNAs belonging to the 14q32 chromosomic locus identifies two different subgroups of individuals with recent onset Stage 3 type 1 diabetes [first cohort, untargeted]

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Department of Medicine, surgery and neuroscience, University of Siena
Accession:
PRJNA1105085
ID:
1105085
13.

A set of circulating microRNAs belonging to the 14q32 chromosomic locus identifies two different subgroups of individuals with recent onset Stage 3 type 1 diabetes [second cohort, untargeted]

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Department of Medicine, surgery and neuroscience, University of Siena
Accession:
PRJNA1105084
ID:
1105084
14.

A set of circulating microRNAs belonging to the 14q32 chromosomic locus identifies two different subgroups of individuals with recent onset Stage 3 type 1 diabetes [first cohort, targeted]

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Department of Medicine, surgery and neuroscience, University of Siena
Accession:
PRJNA1105079
ID:
1105079
15.

Identification of RNAs associated with the Caenorhabditis elegans spliced-leader trans-splicing proteins SNA-2, SNA-3, SNR-2 and SUT-1 proteins by RIP-Seq.

Project data type: Other
Scope:
Monoisolate
European Bioinformatics Institute
Accession:
PRJEB64556
ID:
1104909
16.

Streptomyces rochei FE-3-1

Project data type: Raw sequence reads
Scope:
Multispecies
Hunan Institute of Microbiology
Accession:
PRJNA1098797
ID:
1098797
17.

Thr4 phosphorylation on RNA Pol II occurs at early transcription regulating 3’-end processing

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Epigenomics
Scope:
Multiisolate
Molecular Biosciences, The University of Texas at Austin
Accession:
PRJNA1093446
ID:
1093446
18.

Thr4 phosphorylation on RNA Pol II occurs at early transcription regulating 3’-end processing

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
University of Texas-Austin
Accession:
PRJNA1093031
ID:
1093031
19.

mouse gut metagenome

The effects of Clostridium butyricum against virus infection 3

Taxonomy:
mouse gut metagenome
Project data type: Targeted Locus (Loci)
Scope:
Multiisolate
Department of Molecular Epidemiology and Biomedical Sciences, Aichi Medical University
Accession:
PRJDB13291
ID:
1092033
20.

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