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Organizing biological data

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The following term was not found in BioProject: 3<77.>opopop1.

Select item 11794441.

Urocitellus parryii (Arctic ground squirrel) genome, mUroPar1

Organism:: Urocitellus parryii

Taxonomy:: Urocitellus parryii (Arctic ground squirrel)

: Umbrella project

Vertebrate Genomes Project

Accession:: PRJNA1179444
ID:: 1179444

Select item 11781142.

Urocitellus parryii isolate:mUroPar1

Urocitellus parryii (Arctic ground squirrel) genome, mUroPar1, haplotype 2

Organism:: Urocitellus parryii

Taxonomy:: Urocitellus parryii (Arctic ground squirrel)

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

Vertebrate Genomes Project

Accession:: PRJNA1178114
ID:: 1178114

Select item 11781133.

Urocitellus parryii isolate:mUroPar1

Urocitellus parryii (Arctic ground squirrel) genome, mUroPar1, haplotype 1

Organism:: Urocitellus parryii

Taxonomy:: Urocitellus parryii (Arctic ground squirrel)

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

Vertebrate Genomes Project

Accession:: PRJNA1178113
ID:: 1178113

Select item 11542334.

Virus, Varidnaviria, Bamfordvirae, Nucleocytoviricota, Megaviricetes, Algavirales, Phycodnaviridae, Chlorovirus

Chlorovirus Diversity

: Project data type: Genome sequencing and assembly

Scope:: Multispecies

University of Nebraska-Lincoln

Accession:: PRJNA1154233
ID:: 1154233

Select item 11529535.

Analysis of transcriptional fidelity during heat stress in A. thaliana

: Project data type: Raw sequence reads

Scope:: Multispecies

Hungarian University of Agriculture and Life Sciences

Accession:: PRJNA1152953
ID:: 1152953

Select item 11462956.

Project code BXK

18S V9 amplicon sequencing of Plankton Planet pilot project DNA samples (TARA Ocean and Polar Circle stations 189 to 223)

: Project data type: Other

Scope:: Monoisolate

Genoscope

Accession:: PRJEB53911
ID:: 1146295

Select item 11421977.

CircSeq of neurons

: Project data type: Raw sequence reads

Scope:: Multispecies

Mississippi State University

Accession:: PRJNA1142197
ID:: 1142197

Select item 11419348.

CircSeq of Brain organoids

: Project data type: Raw sequence reads

Scope:: Multispecies

Mississippi State University

Accession:: PRJNA1141934
ID:: 1141934

Select item 11401149.

Disparate pathways for extrachromosomal DNA biogenesis and genomic DNA repair

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Other

Scope:: Multiisolate

Stanford University

Accession:: PRJNA1140114
ID:: 1140114

Select item 112561110.

De novo gene synthesis by an antiviral reverse transcriptase [cDIP-seq]

Taxonomy:: Escherichia coli str. K-12 substr. MG1655

: Project data type: Other

Scope:: Multiisolate

Sternberg Lab, Biochemistry and Molecular Biophysics, Columbia University

Accession:: PRJNA1125611
ID:: 1125611

Select item 112561011.

De novo gene synthesis by an antiviral reverse transcriptase [RIP-seq]

Taxonomy:: Escherichia coli str. K-12 substr. MG1655

: Project data type: Other

Scope:: Multiisolate

Sternberg Lab, Biochemistry and Molecular Biophysics, Columbia University

Accession:: PRJNA1125610
ID:: 1125610

Select item 112560912.

De novo gene synthesis by an antiviral reverse transcriptase [RNA-seq]

Taxonomy:: Escherichia coli str. K-12 substr. MG1655

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Sternberg Lab, Biochemistry and Molecular Biophysics, Columbia University

Accession:: PRJNA1125609
ID:: 1125609

Select item 111462313.

Dimethyl Fumarate Mediates Sustained VSMC Remodeling in a Mouse Model of Cerebral Aneurysm

Organism:: Mus musculus

Taxonomy:: Mus musculus (house mouse)

: Project data type: Transcriptome or Gene expression

Scope:: Monoisolate

Neurosurgery, Tulane University

Accession:: PRJNA1114623
ID:: 1114623

Select item 111352314.

Efficient small DNA fragment sequencing and miRNA, small RNA or csRNA-seq libraries using AVITI

: Project data type: Other

Scope:: Multispecies

Dr. Duttke Lab, School of Molecular Biosciences, Washington State University

Accession:: PRJNA1113523
ID:: 1113523

Select item 111151115.

Functional Optimization of Designer Cardiac Organoids Enabled by Machine Learning Techniques

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Syracuse University

Accession:: PRJNA1111511
ID:: 1111511

Select item 109637516.

Stem-loop and circle-loop TADs generated by directional pairing of boundary elements have distinct physical and regulatory properties

Organism:: Drosophila melanogaster

Taxonomy:: Drosophila melanogaster (fruit fly)

: Project data type: Other

Scope:: Multiisolate

Paul Schedl lab, Department of Molecular Biology, Princeton University

Accession:: PRJNA1096375
ID:: 1096375

Select item 109631717.

Chromosome structure in Drosophila is determined by boundary pairing not loop extrusion

Organism:: Drosophila melanogaster

Taxonomy:: Drosophila melanogaster (fruit fly)

: Project data type: Other

Scope:: Multiisolate

Paul Schedl lab, Department of Molecular Biology, Princeton University

Accession:: PRJNA1096317
ID:: 1096317

Select item 108250618.

Ecc_DNA identificaiton based on circle-seq for hydroquinone indcued malignant transformaned TK6 cells

: Project data type: Raw sequence reads

Scope:: Multispecies

Guangdong Medical University

Accession:: PRJNA1082506
ID:: 1082506

Select item 106537319.

Ribo– RNA-seq of psoriasis mouse model delivered (i.v.) EPIC by LNP at D1.5

Organism:: Mus musculus

Taxonomy:: Mus musculus (house mouse)

: Project data type: Other

Scope:: Multiisolate

Institutes of Biological Sciences, Fudan University

Accession:: PRJNA1065373
ID:: 1065373

Select item 105759020.

Effects of ROS Damage on MtDNA Mutations in Oocytes during Female Reproductive Aging

: Project data type: Raw sequence reads

Scope:: Multispecies

Westlake University

Accession:: PRJNA1057590
ID:: 1057590

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