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1.

Gastrointestinal Microbiome of SARS-CoV-2 Infected Individuals and Macaques

Project data type: Raw sequence reads
Scope:
Multispecies
Barrier Immunity Section
Accession:
PRJNA1136958
ID:
1136958

2.

RNA sequencing of tumors from mice fed diets excluding methionine/tryptophan/niacin (Part 2)

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
NGS core facility, Research Institute for Microbial Diseases, Osaka University
Accession:
PRJNA1034007
ID:
1034007

3.

FLO-OceanOmics Great Barrier Reef voyage 2 eDNA sequencing

Project data type: Other
Scope:
Monoisolate
minderoo foundation
Accession:
PRJEB63673
ID:
990026

4.

Exposure to lung-migrating helminth protects against murine SARS-CoV-2 infection through macrophage-dependent T cell activation

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Epigenomics
Scope:
Multiisolate
LPD, Type 2 Immunity Section, National Institute of Health
Accession:
PRJNA950194
ID:
950194

5.

Exposure to lung-migrating helminth protects against murine SARS-CoV-2 infection through macrophage-dependent T cell activation

Umbrella project
LPD, Type 2 Immunity Section, National Institute of Health
Accession:
PRJNA950091
ID:
950091

6.

Transcriptional profiling of Rat PFC 2 hours after the beginnig of stress

Organism:
Rattus norvegicus
Taxonomy:
Rattus norvegicus (Norway rat)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Computational Biology, Department of Molecular and Translational Medicine, University of Brescia
Accession:
PRJNA930623
ID:
930623

7.

Deciphering cell states and genealogies of human hematopoiesis with single-cell multi-omics [Aged 2]

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Other
Scope:
Multiisolate
Vijay Sankaran lab and Jonathan Weissman lab, Genetics, Broad Institute and Whitehead Institute
Accession:
PRJNA906956
ID:
906956

8.

Exposure to lung-migrating helminth protects against murine SARS-CoV-2 infection through macrophage-dependent T cell activation

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
LPD, Type 2 Immunity Section, National Institute of Health
Accession:
PRJNA903774
ID:
903774

9.

SND1 binds SARS-CoV-2 negative-sense RNA and promotes viral RNA synthesis through NSP9

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Other
Scope:
Multiisolate
LncRNA and Infection Biology (LRIB), Helmholtz Institute for RNA-based Infection Research
Accession:
PRJNA899002
ID:
899002

10.

CRISPR/Cas9-mediated repair of oncogenic V560G-KIT in HMC-1.2 renders a novel human mast cell line with a single KIT mutation (D816V): an improved preclinical model for therapeutic research on mastocytosis

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Laboratory of Allergic Diseases, Mast Cell Biology Section, NIAID (National Institutes of Health)
Accession:
PRJNA893637
ID:
893637

11.

Cesarean section induced dysbiosis promotes a type 2 biased immune response, but has no effects on oxazolone-induced dermatitis in mice

Project data type: Raw sequence reads
Scope:
Multispecies
University of Copenhagen
Accession:
PRJNA890556
ID:
890556

12.

Transcriptional programing of helper T cell metabolism by the IL-2-STAT5 axis

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Other
Scope:
Multiisolate
Biodata Mining & Discovery Section, Office of Science & Technology, NIAMS
Accession:
PRJNA854592
ID:
854592

13.

Non-productive infection of glial cells with SARS-CoV-2 in hamster organotypic cerebellar slice cultures

Organism:
Mesocricetus auratus
Taxonomy:
Mesocricetus auratus (golden hamster)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Prion Diseases Section, One Health Division, National Microbiology Laboratory; Public Health Agency of Canada
Accession:
PRJNA833474
ID:
833474

14.

Uterine injury during diestrus leads to embryo spacing defects and perturbations in the Cox-2 pathway in subsequent pregnancies

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Stanford University School of Medicine
Accession:
PRJNA816902
ID:
816902

15.

Bidirectional genome-wide CRISPR screens reveal host factors regulating SARS-CoV-2, MERS-CoV and seasonal HCoVs

Project data type: Other
Scope:
Multispecies
Genetic Perturbation Platform, Broad Institute
Accession:
PRJNA733168
ID:
733168

16.

Ginkgo biloba season sample 2

Ginkgo biloba season sample 2 Raw sequence reads

Organism:
Ginkgo biloba
Taxonomy:
Ginkgo biloba (maidenhair tree)
Project data type: Raw sequence reads
Scope:
Environment
Central south university
Accession:
PRJNA718685
ID:
718685

17.

Differential expression of Triggering Receptor Expressed on Myeloid Cells (Trem)-2 in tissue eosinophils

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Immunopathogenesis Section, National Institute of Allergy and Infectious Diseases, National Institutes of Health
Accession:
PRJNA666161
ID:
666161

18.

Unfractionated (>0.2 uM) seawater samples from GEOTRACES GP13 transect

Unfractionated (>0.2 uM) seawater samples from GEOTRACES GP13 transect Targeted loci environmental

Taxonomy:
seawater metagenome
Project data type: Targeted loci environmental
Scope:
Environment
University of Southern California
Accession:
PRJNA658385
ID:
658385

19.

The SARS-CoV-2 RNA-protein interactome in infected human cells

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Other
Scope:
Multiisolate
Stanford University
Accession:
PRJNA646247
ID:
646247

20.

Pluteus keselakii spec. nov.

Sevcikova et al., Pluteus keselakii (Pluteaceae, Agaricales), a new species in section Celluloderma; Phytotaxa 432 (2), 181-189 (2020)

Project data type: Other
Scope:
Monoisolate
Institute of Geology ASCR
Accession:
PRJEB33836
ID:
614175

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