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Organizing biological data
Molecular characterization of Escherichia coli collected from an urban river in Johannesburg South Africa
A chinese study of gut microbiota in patients before and after cardiac surgery
Complete Genome of oxa-48 producing E.coli, Switzerland
Escherichia coli PJI
Genomic profile of Extraintestinal Pathogenic Escherichia coli isolates
Enterococcus faecalis genome sequencing
Effects of organic matter and microbial community structure on BA (barite) availability and phytoremediation in flooded soils
Enterobacteriaceae
Kafue and Katete
Molecular Epidemiological Surveillance of Plasmid-Mediated Colistin Resistance Gene mcr-1 in Escherichia coli from the Carriage in Healthy Humans across China, 2016-2024
Escherichia coli
Escherichia coli ST131 population dynamics in Calgary, Alberta, Canada.
Protective effects of Mycobacterium vaccae ATCC 15483 against Western diet-induced weight gain, visceral adiposity, neuroinflammation, and behavior in adolescent male mice
Metabarcoding with Illumina and Oxford Nanopore Technologies Provides Unique Insight into the Mycobiota of Tree Seeds
Metabarcoding for Tree Seeds - ONT data
Metabarcoding for Tree Seeds
Timing matters: Late, but not early, exercise training ameliorates MASLD in part by modulating the gut-liver axis in mice
While exercise is generally beneficial for the amelioration of Metabolic dysfunction-associated steatotic liver disease (MASLD), little is known about the best timing of exercise. Here we demonstrate in APOE*3-Leiden.CETP mice, an MASLD model, that specifically late, but not early, active period aerobic exercise leads to fat loss, amelioration of MASLD development and lower liver lipids. These changes coincide with a change in the gut microbiota composition of only late exercising mice towards a short-chain fatty acids producing profile. A fecal microbiota transplantation from late exercising mice to sedentary mice has partially reproduced MASLD-ameliorating effects of late exercise, depending on the success of the transplantation. These findings demonstrate the importance of the timing when conducting lifestyle interventions and lay a foundation for future clinical trials which can be used to adapt clinical guidelines for MASLD treatment.
Microbial response to a port oil spill: community dynamics and potential for bioremediation
In this work we study the microbial communities after a port oil spill
Impact of SA-NP and GAS-NP nanoparticles on bacterial wilt disease (Ralstonia solanacearum) suppression and soil microbial biodiversity
Bacteria
FDA CVM NARMS - EPA One Health NRSA Surface Water Pilot
FDA CVM NARMS - EPA One Health Watershed Surface Water Pilot
Long_term_population_dynamics_of_Escherichia_coli_causing_bloodstream_infection_in_Malawi
GHT-SELEX data for transcription factors analyzed by the Codebook Consortium
Genomic HT-SELEX data for: GHT-SELEX demonstrates unexpectedly high intrinsic sequence specificity of human transcription factors
A sedimentary ancient DNA perspective on human and carnivore persistence through the Late Pleistocene in El Mirón Cave, Spain
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