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Items: 13

1.

Mechanism of siRNA production by a plant Dicer-RNA complex in dicing-competent conformation

Organism:
Arabidopsis thaliana
Taxonomy:
Arabidopsis thaliana (thale cress)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Jacobsen Lab, Department of Molecular, Cell and Developmental Biology, University of California, Los Angeles
Accession:
PRJNA744279
ID:
744279
2.

Escherichia coli strain:K-12 substr. MG1655

Antibiotic resistance by high-level intrinsic suppression of a frameshift mutation in an essential gene

Taxonomy:
Escherichia coli
Project data type: Raw sequence reads
Scope:
Multiisolate
Uppsala University
Accession:
PRJNA601628
ID:
601628
3.

Arsenic-induced polyadenylation of canonical histone H3.1 mRNA displaces histone variant H3.3 from critical gene regulatory regions

Organism:
Homo sapiens
Taxonomy:
Homo sapiens (human)
Project data type: Other
Scope:
Multiisolate
Center for Public Health Genomics, University of Virginia
Accession:
PRJNA559531
ID:
559531
4.

Transcriptional defects and reprogramming barriers in somatic cell nuclear reprogramming as revealed by single-embryo RNA sequencing

Organism:
Mus musculus
Taxonomy:
Mus musculus (house mouse)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Key Laboratory of Embryo Development and Reproductive Regulation of Anhui Province
Accession:
PRJNA450329
ID:
450329
5.

Arabidopsis thaliana

A Dicer-Independent Route for Biogenesis of siRNAs that Direct DNA Methylation in Arabidopsis

Taxonomy:
Arabidopsis thaliana (thale cress)
Project data type: Other
Scope:
Multiisolate
School of Life Sciences, Tsinghua University
Accession:
PRJNA300285
ID:
300285
6.

Arabidopsis thaliana

Genome-Wide Identification of Small RNAs that Are Independent of DCL Proteins in Arabidopsis

Taxonomy:
Arabidopsis thaliana (thale cress)
Project data type: Epigenomics
Scope:
Monoisolate
Tsinghua Uinversity
Accession:
PRJNA291944
ID:
291944
7.

Homo sapiens

Sensing the end: how TUT7 controls the fate of precursor microRNAs by uridylation

Taxonomy:
Homo sapiens (human)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Narry Kim Lab, Center for RNA Research, Institute for Basic Science
Accession:
PRJNA271095
ID:
271095
8.

Homo sapiens

Coding mutations and loss-of-imprinting in human pluripotent cells derived by nuclear transfer and defined factors [RNA-Seq]

Taxonomy:
Homo sapiens (human)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Nissim Benvenisty Lab, The Azrieli Center for Stem Cells and Genetic Research, Genetics, The Hebrew University of Jerusalem
Accession:
PRJNA261785
ID:
261785
9.

Homo sapiens

Coding mutations and loss-of-imprinting in human pluripotent cells derived by nuclear transfer and defined factors [DNA methylation profiling]

Taxonomy:
Homo sapiens (human)
Project data type: Epigenomics
Scope:
Multiisolate
Nissim Benvenisty Lab, The Azrieli Center for Stem Cells and Genetic Research, Genetics, The Hebrew University of Jerusalem
Accession:
PRJNA261163
ID:
261163
10.

Homo sapiens

Lipopolysaccharide-induced microRNA-146a targets CARD10 and involves in angiogenesis of human umbilical vein endothelial cells

Taxonomy:
Homo sapiens (human)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Plastic and Reconstructive Surgery, Kaohsiung Chang Gung Memorial Hospital
Accession:
PRJNA218514
ID:
218514
11.

Lodderomyces elongisporus NRRL YB-4239

Expression analysis of Lodderomyces elongisporus NRRL YB-4239 grown in glucose or xylose

Taxonomy:
Lodderomyces elongisporus NRRL YB-4239
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Genetics, University of Wisconsin-Madison
Accession:
PRJNA133445
ID:
133445
12.

Scheffersomyces stipitis CBS 6054

Expression analysis of Pichia stipitis CBS 6054 grown in glucose or xylose

Taxonomy:
Scheffersomyces stipitis CBS 6054
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Genetics, University of Wisconsin-Madison
Accession:
PRJNA133443
ID:
133443
13.

Sus scrofa

Effect of DJ-1 on early development in porcine nuclear transfer embryos

Taxonomy:
Sus scrofa (pig)
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Laboratory of Reproduction, Agriculture, Kyoto university
Accession:
PRJNA119395
ID:
119395

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