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Organizing biological data
Arabidopsis thaliana isolate:Arabidopsis wild-type Col-0 mutants
Arabidopsis thaliana isolate:Arabidopsis wild-type Col-0 mutants Genome sequencing
Small RNAs from AGO1 IP Col-0 and skb1-1
Total RNA RNAseq from roots of Arabidopsis Col-0 and siz1-2, infected and non-infected with Heterodera schachtii
RNA-seq data for 0 day Meishan pig bone and liver tissue
Analysis of mouse healthy enteroids and colonoids (3D organoid models from small intestine and colon) exposed to chemotherapy agent Doxorubicin (DOX) sampled at four doses (0.1, 1, 10 and 30uM) and three time points (24, 48 and 72h).
ileal and colonic microbiota in weaned piglets fed with basal diet or 0.5% Lactobacillus reuteri SLZX19-12
RNA-seq of small intestinal organoids treated with IL-22 for 0, 1 and 4 hours
Analysis of human enteroids and colonoids (3D organoid models from small intestine and colon) exposed to chemotherapy agent and tyrosine kinase inhibitor (TKI) gefitinib sampled at four doses (0.1, 1, 10 and 30uM) and at three time points (24, 48 and 72h) since initial exposure
RNA-seq of small intestinal organoids treated with IL-13 for 0, 1, 4 8 and 24 hours and with the BMP signaling inhibitor DMH1
Profiling dynamics of multi-omics in Arabidopsis whole seeds from Col-0 and Cvi
Arabidopsis thaliana breed:Col-0
Arabidopsis thaliana ecotype Col-0 double-stranded RNA treatment against the chalcone synthase gene
RNA sequencing for enteroids treated with different concentrations of IL-17 (0 ng/ml. 1 ng/ml, 10 ng/ml and 100 ng/ml)
Arabidopsis thaliana strain:col-0
Small RNAs expressed in 3-day-old seedlings of Arabidopsis Col-0 and sgs3-11.
Aegilops tauschii reference genome sequence Aet v5.0 including annotation of small RNAs and reannotation of protein-coding genes
Freshwater community DNA from < 0.45 um and > 0.45 um size fractions
Arabidopsis thaliana cultivar:col-0
Arabidopsis thaliana cultivar:col-0 Raw sequence reads
Small RNA sequencing of progenies of Col-0 grafted on msh1; Col-0 grafted on dcl2,3,4,msh1; msh1 mutant; dcl2,3,4,msh1 quadruple mutant in Arabidopsis [msh1_graft_sRNA-seq]
RNA Seq profiling of transcriptional response in IFNg-primed C57BL6 mouse primary bone marrow derived macrophages exposed to vehicle, compound 2062 and an inactive control analog at 0, 1, 2 and 6 hours post treatment
Arabidopsis thaliana
RNA-seq and small RNA-seq of Col-0 and amiR-PAG1
Arabidopsis thaliana small RNA from epidermis and vasculature tissues of Col-0 and ago1 mutants leaves
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