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Organizing biological data

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Select item 11087521.

Extracellular vesicles from early- and late-passage endothelial cells differentially regulate cerebrovascular and brain aging in mice via changes in a miR-17-5p-dependent pathway

Organism:: Mus musculus

Taxonomy:: Mus musculus (house mouse)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Neurological department, The Affiliated Hospital of Guangdong Medical University

Accession:: PRJNA1108752
ID:: 1108752

Select item 10968522.

Homo sapiens

Homo sapiens Genome sequencing and assembly

Taxonomy:: Homo sapiens (human)

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

Nanchang University

Accession:: PRJNA1096852
ID:: 1096852

Select item 10681383.

Associations of the colon tissue microbiome and circulating bile acids with colorectal adenoma among average-risk women: possible implications for racial disparities

: Project data type: Raw sequence reads

Scope:: Multispecies

NCI

Accession:: PRJNA1068138
ID:: 1068138

Select item 10513354.

Arbuscular mycorrhiza convey significant plant carbon to a diverse hyphosphere microbial food web and mineral-associated organic matter

: Project data type: Raw sequence reads

Scope:: Multispecies

University of California, Berkeley

Accession:: PRJNA1051335
ID:: 1051335

Select item 10201985.

An RNA-seq study in Friedreich ataxia patients identified miR148a-3p as a putative prognostic biomarker of the disease.

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Sequentia Biotech

Accession:: PRJNA1020198
ID:: 1020198

Select item 9706686.

Platelet Reactivity ExpreSsion Score Predicts Cardiovascular Risk

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Berger & Ruggles Labs, Department of Medicine, New York University

Accession:: PRJNA970668
ID:: 970668

Select item 9058977.

Ecytonucleospora hepatopenaei isolate:CIBAehp1

Ecytonucleospora hepatopenaei isolate:CIBAehp1 Genome sequencing and assembly

Organism:: Ecytonucleospora hepatopenaei

Taxonomy:: Enterocytozoon hepatopenaei

: Project data type: Genome sequencing and assembly

Scope:: Monoisolate

ICAR-Central Institute of Brackishwater Aquaculture

Accession:: PRJNA905897
ID:: 905897

Select item 9026268.

RECOVER

PROBIOTIC EFFECTS ON IMMUNITY AND MICROBIOME IN HIV-1 DISCORDANT PATIENTS

: Project data type: Other

Scope:: Monoisolate

IrsiCaixa Institute for AIDS Research, Badalona, Spain

Accession:: PRJEB56022
ID:: 902626

Select item 8841869.

Bacteriophage sp.

Characteristics of the novel Enterococcus vB_Efa29212_2e and vB_Efa29212_3e bacteriophages

: Project data type: Genome sequencing and assembly

Scope:: Multiisolate

Faculty of Biology and Environmental Protection, University of Lodz

Accession:: PRJNA884186
ID:: 884186

Select item 85798410.

DNA methylation biomarkers for non-invasive detection of triple negative breast cancer using liquid biopsy

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Epigenomics

Scope:: Multiisolate

Cancer Epigenomics, Deutsches Krebsforschungszentrum

Accession:: PRJNA857984
ID:: 857984

Select item 84923911.

Locomotor ability and brain gene expression in Drosophila melanogaster exhibit non-monotonic dose-response to HFPO-DA

Organism:: Drosophila melanogaster

Taxonomy:: Drosophila melanogaster (fruit fly)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Boz, Boz Life Science Research and Teaching Institute

Accession:: PRJNA849239
ID:: 849239

Select item 84168012.

Counterintuitive effect of extracellular fluid viscosity on enhancing motility and metastasis

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Oncology, Georgetown University

Accession:: PRJNA841680
ID:: 841680

Select item 81328513.

Small mammal detection in agro-ecosystems

Landscape characteristics affecting small mammal occurrence in heterogeneous olive grove agro-ecosystems

: Project data type: Other

Scope:: Monoisolate

CIBIO-INBIO RESEARCH CENTER IN BIODIVERSITY AND GENETIC RESOURCES

Accession:: PRJEB49250
ID:: 813285

Select item 81252414.

Integrative analysis of DNA methylation and gene expression identified follicular thyroid cancer-specific diagnostic biomarkers [Methylation]

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Epigenomics

Scope:: Multiisolate

Zhejiang University

Accession:: PRJNA812524
ID:: 812524

Select item 81251215.

Integrative analysis of DNA methylation and gene expression identified follicular thyroid cancer-specific diagnostic biomarkers [Expression]

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Zhejiang University

Accession:: PRJNA812512
ID:: 812512

Select item 79279316.

DNA methylation profiles in pneumonia patients reflect changes in cell types and pneumonia severity

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Epigenomics

Scope:: Multiisolate

S.C.V.S.A., University of Parma

Accession:: PRJNA792793
ID:: 792793

Select item 70718417.

Microbiome of bowel cancer screening samples

Microbiome analysis of over 2000 NHS Bowel Cancer Screening Programme (NHSBCSP) samples shows the potential to improve screening accuracy

: Project data type: Other

Scope:: Monoisolate

Leeds Institute of Research at St James's, University of Leeds, United Kingdom

Accession:: PRJEB37635
ID:: 707184

Select item 62867518.

The transcriptomic response of cells to a drug combination is more than the sum of the responses to the monotherapies

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Icahn School of Medicine at Mount Sinai

Accession:: PRJNA628675
ID:: 628675

Select item 61443219.

Maize ear microbione

Fusarium verticillioides and microbiome responses in maize ears driven by chemical and biological fungicide treatments

: Project data type: Other

Scope:: Monoisolate

UNIVERSIDADE FEDERAL DE LAVRAS

Accession:: PRJEB37077
ID:: 614432

Select item 61422520.

Bugs and drugs

The effect of moxidectin on the faecal microbiome of horses with low parasite burdens

: Project data type: Other

Scope:: Monoisolate

Royal agricultural university

Accession:: PRJEB35303
ID:: 614225

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