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Organizing biological data
Nonlinear DNA methylation trajectories in aging male mice [RNA-seq]
Transcriptional profiling of murine distal colon from C57BL/6 (WT), Il20KO, Il20raKO and Il20rbKO mice during acute DSS colitis
Transcriptional profiling of murine distal colon from C57BL/6 (WT) and Stat2KO mice during acute DSS colitis.
Resolving Resident Colonic Muscularis Macrophage Diversity and Plasticity During Colitis
Bioengineered human colon organoids with in vivo-like complexity and function
Nonlinear DNA methylation trajectories in aging mice [RRBS]
Differential gene expression analysis of colonic epithelial cells from wildtype and PRMT5 heterozygote mice
Loss of colonic primary cilia promotes inflammation and carcinogenesis.
Sulawesi Crocidura shrew gut microbiomes
DNA methylation analysis of normal colon organoids from familial adenomatous polyposis patients reveals novel insight into colon cancer development
Seq-Scope: Submicrometer-resolution spatial barcoding technology that enables microscopic examination of tissue transcriptome at single cell and subcellular levels
mRNA transcriptome sequencing of colitis from Il1f5+/+, Il1f5-/-, Il1f9+/+ and Il1f9-/- mice after administered DSS and of colorectal tumors from Il1f5+/+, Il1f5-/-, Il1f9+/+ and Il1f9-/- mice after AOM/DSS colorectal tumor model treatment
Profiling the immune cell gene signature of in vivo model of IBD
Transcriptomic and Proteomic Signatures of Stemness and Differentiation in the Colon Crypt
Transcriptional responses of colon tissues following ex-vivo colonization with human microbiome
Single cell RNA sequencing analysis of the mouse colonic mesenchyme (Drop-seq)
mRNA transcriptome sequencing of colon tissues from Usp25+/+ and Usp25-/- mice treated with 2.5% DSS for 5 five days followed by two-day normal water
mRNA transcriptome sequencing of colon tissues from Usp25+/+ and Usp25-/- mice treated with 2.5% DSS for 5 five days followed by two-day normal water.
STAT3 MODULATION AS A PROMISING THERAPEUTIC OPTION IN A PRECLINICAL MOUSE MODEL OF ULCERATIVE COLITIS
Genome-wide DNA methylation profiling of primary colorectal laterally spreading tumors identifies disease-specific epi-mutations on common pathways
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