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Organizing biological data

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The following terms were not found in BioProject: Hnot, subset<qqtest20>, existsmid.

Select item 11636421.

FabT_+or-Tween_S.pyogenesM28_Transcriptomic analysis

: Project data type: Other

Scope:: Monoisolate

European Bioinformatics Institute

Accession:: PRJEB79923
ID:: 1163642

Select item 11487852.

Complete mitochondrial genome of Rhaphidophora duxiu (Orthoptera: Rhaphidophoridae: Rhaphidophorinae)

: Project data type: Raw sequence reads

Scope:: Multispecies

Inner Mongolia Normal University

Accession:: PRJNA1148785
ID:: 1148785

Select item 11423513.

Early identification of a nosocomial outbreak of vancomycin-resistant Enterococcus faecium by Fourier-transform infrared spectroscopy and performance comparison with PFGE and WGS

Early identification of a nosocomial outbreak of vancomycin-resistant Enterococcus faecium

: Project data type: Other

Scope:: Monoisolate

UNIVERSITY OF COLOGNE

Accession:: PRJEB73881
ID:: 1142351

Select item 11151374.

Human skeletal muscle possesses an epigenetic memory of high intensity interval training

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Epigenomics

Scope:: Multiisolate

Norwegian School of Sport Sciences

Accession:: PRJNA1115137
ID:: 1115137

Select item 10254465.

Bulk RNAseq of punch biopsies following intradermal injection of gold nanoparticles loaded with diabetes autoantigen, or unijected controls, in humans

: Project data type: Other

Scope:: Monoisolate

European Bioinformatics Institute

Accession:: PRJEB66479
ID:: 1025446

Select item 10074636.

Ralstonia solanacearum differentially modulates soil physciochemical properties and rhizospheric bacteriome of resistant and susceptible flue cured tobacco cultivars

: Project data type: Raw sequence reads

Scope:: Multispecies

South China Agricultural University

Accession:: PRJNA1007463
ID:: 1007463

Select item 9190737.

The impact of Mmu17 non-Hsa21 orthologous genes in the Ts65Dn mouse model of Down syndrome: the “gold standard” refuted

Organism:: Mus musculus

Taxonomy:: Mus musculus (house mouse)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Bianchi Lab, NHGRI, National Institute of Health

Accession:: PRJNA919073
ID:: 919073

Select item 9152068.

Unstable EBV latency drives inflammation in multiple sclerosis patient derived spontaneous B cells [EBV WGS]

Organism:: human gammaherpesvirus 4

Taxonomy:: human gammaherpesvirus 4 (Epstein-Barr virus)

: Project data type: Other

Scope:: Multiisolate

Genomics, Bioinformatics, The Wistar Institute

Accession:: PRJNA915206
ID:: 915206

Select item 8808749.

Application of a New Approach Methodology (NAM)-based Strategy for Genotoxicity Assessment of Data-poor Compounds

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Mechanistic Studies Division Genomics Laboratory, Health Canada, Government of Canada

Accession:: PRJNA880874
ID:: 880874

Select item 85333010.

scRNA-Seq datasets profiling peripheral leukocyte response when co-cultured with fibroblasts isolated from reindeer back skin or antler velvet.

Organism:: Rangifer tarandus

Taxonomy:: Rangifer tarandus (reindeer)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Biernaskie Lab, Comparative Biology and Experimental Medicine, University of Calgary

Accession:: PRJNA853330
ID:: 853330

Select item 80453411.

Toxicity Testing in the 21st Century: An Integrated Approach to Genetic Safety Testing using the TGx-DDI Genomic Biomarker and High-Throughput CometChip® [Sequencing]

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Mechanistic Studies Division Genomics Laboratory, Health Canada, Government of Canada

Accession:: PRJNA804534
ID:: 804534

Select item 80452512.

Toxicity Testing in the 21st Century: An Integrated Approach to Genetic Safety Testing using the TGx-DDI Genomic Biomarker and High-Throughput CometChip® [NanoString]

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Mechanistic Studies Division Genomics Laboratory, Health Canada, Government of Canada

Accession:: PRJNA804525
ID:: 804525

Select item 74904213.

Single-cell RNA-Seq datasets profiling PBMCs from venous blood supply to antler velvet or to backskin 3 days post-wound

Organism:: Rangifer tarandus

Taxonomy:: Rangifer tarandus (reindeer)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Biernaskie Lab, Comparative Biology and Experimental Medicine, University of Calgary

Accession:: PRJNA749042
ID:: 749042

Select item 73492614.

Blood and Brain Gene Expression Signatures of Chronic Intermittent Ethanol Consumption in Mice

Organism:: Mus musculus

Taxonomy:: Mus musculus (house mouse)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

R. O. Messing, Waggoner Center for Alcohol and Addiction Research, Dell Medical School, University of Texas at Austin

Accession:: PRJNA734926
ID:: 734926

Select item 72249315.

circRNAs microarray analysis in colorectal caner tissues

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

普外科, 江苏省人民医院

Accession:: PRJNA722493
ID:: 722493

Select item 71921316.

CometChip® and TempO-Seq®: A high-throughput 96-well platform to measure and classify DNA damaging agents in human HepaRG™ Cells [HCC3]

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Mechanistic Studies Division Genomics Laboratory, Health Canada, Government of Canada

Accession:: PRJNA719213
ID:: 719213

Select item 71353817.

Wolbachia pipientis strain:wCin2

Wolbachia pipientis strain:wCin2 Genome sequencing and assembly

Taxonomy:: Wolbachia pipientis

: Project data type: Genome sequencing and assembly

Scope:: Multiisolate

BOKU

Accession:: PRJNA713538
ID:: 713538

Select item 71297518.

Wolbachia pipientis strain:wCer2

Wolbachia pipientis strain:wCer2 Genome sequencing and assembly

Taxonomy:: Wolbachia pipientis

: Project data type: Genome sequencing and assembly

Scope:: Multiisolate

BOKU

Accession:: PRJNA712975
ID:: 712975

Select item 70160819.

The evolution of trade-offs between defense and reproduction facilitates the transition towards multicellularity

Taxonomy:: Chlamydomonas reinhardtii

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Systems Immunology, Institute of Clinical Molecular Biology

Accession:: PRJNA701608
ID:: 701608

Select item 68217720.

RNA differential expression between OAW42 ovarian cancer cells and its chemoresistant counterpart OAW42-R

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

plateforme de génomique fonctionnelle et structurale, CHU of Lille, CBP, Lille University

Accession:: PRJNA682177
ID:: 682177

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