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Organizing biological data

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The following term was not found in BioProject: @jyp24.

Select item 9723231.

A transcriptomics based drug repositioning approach to identify drugs with similar activities for the treatment of muscle pathologies in spinal muscular atrophy (SMA) mice.

: Project data type: Raw sequence reads

Scope:: Multispecies

Keele University

Accession:: PRJNA972323
ID:: 972323

Select item 9476392.

A novel Modulator of Ring Stage Translation (MRST) gene alters artemisinin sensitivity in Plasmodium falciparum

: Project data type: Raw sequence reads

Scope:: Multispecies

University of South Florida

Accession:: PRJNA947639
ID:: 947639

Select item 8073633.

RNA Post-transcriptional Modifications in Two Large Subunit Intermediates Populated in E.coli Cells Expressing Helicase Inactive R331A DbpA

Taxonomy:: Escherichia coli

: Project data type: Other

Scope:: Multiisolate

Koculi, Biochemistry and Molecular Biology, The Johns Hopkins University, Bloomberg School of Public Health

Accession:: PRJNA807363
ID:: 807363

Select item 7227344.

Natural Mucosal Barriers and COVID-19 in Children

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Albert Einstein College of Medicine

Accession:: PRJNA722734
ID:: 722734

Select item 6036495.

Bovine hepatic miRNAome profiling and differential miRNA expression analyses between beef steers with divergent feed efficiency phenotypes

Organism:: Bos taurus

Taxonomy:: Bos taurus (domestic cattle)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Agricultural, Food & Nutritional Science, University of Alberta

Accession:: PRJNA603649
ID:: 603649

Select item 4881636.

Transcriptome analysis of flooded rice spikelets in response to high temperature at flowering

Organism:: Oryza sativa

Taxonomy:: Oryza sativa (Asian cultivated rice)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Doherty Lab, Biochemistry, NCSU

Accession:: PRJNA488163
ID:: 488163

Select item 4851427.

Carbodiimide reagents for the chemical probing of RNA structure in cells

: Project data type: Other

Scope:: Multispecies

Simon Lab, Molecular Biophysics & Biochemistry, Yale University Chemical Biology Instiute

Accession:: PRJNA485142
ID:: 485142

Select item 4204948.

Transcriptomics and Real-Time PCR analysis reveals a cross-modulatory effect between riboflavin and iron and outlines common and specific responses to riboflavin biosynthesis and uptake in Vibrio cholerae

Taxonomy:: Vibrio cholerae

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Centro de Ciencias Genómicas, Universidad Nacional Autónoma de México

Accession:: PRJNA420494
ID:: 420494

Select item 3508369.

Mus musculus

Glycosylation of the HA protein of H5N1 virus increases its virulence in mice by exacerbating the host immune response

Taxonomy:: Mus musculus (house mouse)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Harbin Veterinary Research Institute

Accession:: PRJNA350836
ID:: 350836

Select item 31489710.

Mus musculus

REV-ERBα influences stability and nuclear localization of the glucocorticoid receptor

Taxonomy:: Mus musculus (house mouse)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

University of Fribourg

Accession:: PRJNA314897
ID:: 314897

Select item 30510611.

Gracilaria changii transcriptomes

Global Transcriptome Analysis of Gracilaria changii 5 (Rhodophyta) in Response to Agarolytic Enzyme and Bacterium

: Project data type: Other

Scope:: Monoisolate

UNIVERSITI PUTRA MALAYSIA

Accession:: PRJEB7650
ID:: 305106

Select item 17485612.

Mus musculus

Novel biomarkers for distributed stem cells: asymmetric self-renewal associated (ASRA) genes identification by combined cDNA micro-array orthogonal intersection and sparse feature analysis

Taxonomy:: Mus musculus (house mouse)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

CSIRO

Accession:: PRJNA174856
ID:: 174856

Select item 14887713.

Homo sapiens

Real-time quantitative PCR analysis of Wnt signalling in human prostate cancer

Taxonomy:: Homo sapiens (human)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Prostate Molecular Oncology, Clinical Medicine, Trinity College Dublin

Accession:: PRJNA148877
ID:: 148877

Select item 14125514.

Homo sapiens

The time-course transcriptomic responses of THP-1 human macrophage-like cells to W-Beijing Mycobacterium tuberculosis strains of different sublineages

Taxonomy:: Homo sapiens (human)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Department of Computer Science, University of Bristol

Accession:: PRJNA141255
ID:: 141255

Select item 13608515.

Mixed Culture Gene Expression of E. coli and Pseudomonas aeruginosa grown on defined media with N-acetyl glucosamine

: Project data type: Transcriptome or Gene expression

Scope:: Multispecies

Supple 377, Biology, Texas State University-San Marcos

Accession:: PRJNA136085
ID:: 136085

Select item 13608316.

Mixed Culture Gene Expression of E. coli and Pseudomonas aeruginosa

: Project data type: Transcriptome or Gene expression

Scope:: Multispecies

Supple 377, Biology, Texas State University-San Marcos

Accession:: PRJNA136083
ID:: 136083

Select item 13189917.

Mus musculus

Renal Dysfunction in the Setting of Massive Hepatic Necrosis: A Network-based Analysis in a Mouse

Taxonomy:: Mus musculus (house mouse)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Schwartz, Surgery, University of Utah

Accession:: PRJNA131899
ID:: 131899

Select item 13024118.

Homo sapiens

EXPRESSION OF VAV1 IN GLIOBLASTOMA MULTIFORME

Taxonomy:: Homo sapiens (human)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

12, Center Cancer Research

Accession:: PRJNA130241
ID:: 130241

Select item 12566119.

Oncorhynchus mykiss

Swimming down-regulates ovarian transcriptomic response of rainbow trout Oncorhynchus mykiss

Taxonomy:: Oncorhynchus mykiss (rainbow trout)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Universitat de Barcelona

Accession:: PRJNA125661
ID:: 125661

Select item 12458920.

Homo sapiens

Gene Expression Profiling Reveals a Massive, Aneuploidy-Dependent Transcriptional Deregulation and Distinct Differences between Lymph Node–Negative and Lymph Node–Positive Colon Carcinomas