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Organizing biological data

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The following term was not found in BioProject: @JYP24.

Select item 11561731.

16s rRNA seqs - biochar amended activated sludge community

: Project data type: Targeted Locus (Loci)

Scope:: Environment

University of Minnesota

Accession:: PRJNA1156173
ID:: 1156173

Select item 11503862.

transcriptome in Lutjanus erythropterus juveniles liver during transportation

: Project data type: Raw sequence reads

Scope:: Multispecies

South China Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences

Accession:: PRJNA1150386
ID:: 1150386

Select item 11338003.

Engineering transcriptional regulators using REPLACE

Organism:: Mesocricetus auratus

Taxonomy:: Mesocricetus auratus (golden hamster)

: Project data type: Other

Scope:: Multiisolate

Peking University

Accession:: PRJNA1133800
ID:: 1133800

Select item 10355064.

A recombination-resistant genome for live attenuated and stable PEDV vaccines by engineering the transcriptional regulatory sequences

Taxonomy:: Porcine epidemic diarrhea virus

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Shenzhen Nanshan People's Hospital and the 6th Affiliated Hospital of Shenzhen University Health Science Center, Department of Pain Medicine and Shenzhen Municipal Key Laboratory for Pain Medicine

Accession:: PRJNA1035506
ID:: 1035506

Select item 10133385.

Soil protist richness and composition affected by primer pair and annealing temperature

: Project data type: Raw sequence reads

Scope:: Multispecies

Northern Arizona University

Accession:: PRJNA1013338
ID:: 1013338

Select item 9727416.

Massively parallel screen uncovers many rare 3’ UTR variants regulating mRNA abundance of cancer driver genes [rare_3utr_gnomad.motif_activity]

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Other

Scope:: Multiisolate

Integrative Biology and Physiology, UCLA

Accession:: PRJNA972741
ID:: 972741

Select item 9727407.

Massively parallel screen uncovers many rare 3’ UTR variants regulating mRNA abundance of cancer driver genes [rare_cosmic]

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Other

Scope:: Multiisolate

Integrative Biology and Physiology, UCLA

Accession:: PRJNA972740
ID:: 972740

Select item 7884728.

A disease-linked lncRNA mutation in RNase MRP inhibits ribosome synthesis [RMRP_SHAPE]

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Other

Scope:: Multiisolate

Tollervey Lab, University of Edinburgh

Accession:: PRJNA788472
ID:: 788472

Select item 6277189.

Increased processing of SINE B2 non coding RNAs unveils a novel type of transcriptome de-regulation underlying amyloid beta neuro-pathology

Organism:: Mus musculus

Taxonomy:: Mus musculus (house mouse)

: Project data type: Other

Scope:: Multiisolate

Zovoilis Lab, Biochemistry and Medical Genetics, University of Manitoba

Accession:: PRJNA627718
ID:: 627718

Select item 54364410.

16S rRNA gene sequencing of 1,479 pregnant women

Gut microbiomic analysis of 1,479 pregnant women during pregnancy

: Project data type: Other

Scope:: Monoisolate

Guangzhou Women and Children Medical Center

Accession:: PRJEB31743
ID:: 543644

Select item 53404811.

MBBR using Arundo donax

raw Arundo donax (A. donax) pieces were applied as carbon source and biofilm carriers for denitrification in a lab-scale moving bed biofilm reactor (MBBR) for the treatment of reverse osmosis concentrate gathered from local wastewater reuse plant.

: Project data type: Other

Scope:: Monoisolate

CHINESE RESEARCH ACADEMY OF ENVIRONMENTAL SCIENCES

Accession:: PRJEB31364
ID:: 534048

Select item 52368512.

MBBR using Arundo donax

: Project data type: Raw sequence reads

Scope:: Multispecies

Chinese academy of environmental sciences

Accession:: PRJNA523685
ID:: 523685

Select item 51278013.

A high rate of polymerization during synthesis of mouse mammary tumor virus DNA alleviates hypermutation by APOBEC3 proteins

: Project data type: Other

Scope:: Monoisolate

Stanislav

Accession:: PRJEB30053
ID:: 512780

Select item 48514214.

Carbodiimide reagents for the chemical probing of RNA structure in cells

: Project data type: Other

Scope:: Multispecies

Simon Lab, Molecular Biophysics & Biochemistry, Yale University Chemical Biology Instiute

Accession:: PRJNA485142
ID:: 485142

Select item 30510615.

Gracilaria changii transcriptomes

Global Transcriptome Analysis of Gracilaria changii 5 (Rhodophyta) in Response to Agarolytic Enzyme and Bacterium

: Project data type: Other

Scope:: Monoisolate

UNIVERSITI PUTRA MALAYSIA

Accession:: PRJEB7650
ID:: 305106

Select item 24738316.

Rattus norvegicus

Effects on gene expression in rat liver after administration of RXR agonists: UAB30, 4-methyl-UAB30, and Targretin

Taxonomy:: Rattus norvegicus (Norway rat)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

The Jackson Laboratory

Accession:: PRJNA247383
ID:: 247383

Select item 18674917.

Mus musculus

Transcriptomic analysis of murine embryos lacking endogenous retinoic acid signaling

Taxonomy:: Mus musculus (house mouse)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Biopuces, IGBMC

Accession:: PRJNA186749
ID:: 186749

Select item 17670818.

Mus musculus

Exendin-4, a glucagon-like peptide-1 receptor agonist prevents mTBI-induced changes in hippocampus gene expression and memory deficits in mice

Taxonomy:: Mus musculus (house mouse)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Computational Biology Core, Laboratory of Genetics and Genomics, NIA-IRP, NIH

Accession:: PRJNA176708
ID:: 176708

Select item 15862719.

Macaca fascicularis

Effects of equol on gene expression in female cynomolgus monkey iliac arteries

Taxonomy:: Macaca fascicularis (crab-eating macaque)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Basic Biomedical Sciences, University of South Dakota

Accession:: PRJNA158627
ID:: 158627

Select item 14125520.

Homo sapiens

The time-course transcriptomic responses of THP-1 human macrophage-like cells to W-Beijing Mycobacterium tuberculosis strains of different sublineages