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Organizing biological data

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The following terms were not found in BioProject: @JYP24, intersectiontriple.

Select item 11614931.

Retinoic acid and TGF-β orchestrate organ-specific programs of tissue-residency [dnRA_Antag]

Organism:: Mus musculus

Taxonomy:: Mus musculus (house mouse)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Microbiology and Immunology, The Peter Doherty Institute for Infection and Immunity

Accession:: PRJNA1161493
ID:: 1161493

Select item 10359272.

Molecular signatures integral to natural reprogramming in the pigment epithelium cells after retinal detachment in Pleurodeles waltl

: Project data type: Raw sequence reads

Scope:: Multispecies

Koltsov Institute of Developmental Biology, Russian Academy of Sciences

Accession:: PRJNA1035927
ID:: 1035927

Select item 10208133.

Integrated analysis of transcriptome and miRNAome reveals the heat stress response of Pinellia ternata seedlings

Taxonomy:: Pinellia ternata

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Biochemistry and Molecular Biology, College of Life Science, Huaibei Normal University

Accession:: PRJNA1020813
ID:: 1020813

Select item 9389184.

ITK Degradation to Block T-cell Receptor Signaling and Overcome Therapeutic Resistance in T-Cell Lymphomas

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Wenchao Wu lab, Sun Yat-sen University Cancer Center

Accession:: PRJNA938918
ID:: 938918

Select item 8557855.

Agricultural management and pesticide use reduce the phosphorus uptake capability of beneficial plant symbionts

Investigating AMF-mediated P transport in arable and grassland field soils collected throughout Europe.

: Project data type: Other

Scope:: Monoisolate

Agroscope Institute for Sustainability Sciences

Accession:: PRJEB52096
ID:: 855785

Select item 8276416.

Dynamic regulation of P-TEFb by 7SK snRNP is integral to the DNA damage response to regulate chemotherapy sensitivity

: Project data type: Raw sequence reads

Scope:: Multispecies

Sichuan University West China Second University Hospital

Accession:: PRJNA827641
ID:: 827641

Select item 6841107.

Raw genome sequence data for Acinetobacter baumannii AB5075 and the gene deletion strains SurA+Skp, SurA+DegPm Skp+DegP and SurA+Skp+DegP

The role of the periplasmic chaperones SurA, Skp and DegP for fitness, outer membrane integrity and virulence of Acinetobacter baumannii AB5075: same-same, but different?

: Project data type: Other

Scope:: Monoisolate

Technical University Munich

Accession:: PRJEB40766
ID:: 684110

Select item 6458818.

Transcriptional profiling and immunophenotyping show sustained activation of blood monocytes in subpatent Plasmodium falciparum infection.

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

James Cook University

Accession:: PRJNA645881
ID:: 645881

Select item 6389709.

human nasopharyngeal metagenome

human nasopharyngeal metagenome Raw sequence reads

Taxonomy:: human nasopharyngeal metagenome

: Project data type: Raw sequence reads

Scope:: Environment

University of Auckland

Accession:: PRJNA638970
ID:: 638970

Select item 60670610.

Chemical modification analysis of a preQ1-I riboswitch in effector-free and bound states

: Project data type: Raw sequence reads

Scope:: Multispecies

University of Rochester

Accession:: PRJNA606706
ID:: 606706

Select item 59555611.

Transcriptomic analysis of fungus Penicillium oxalicum and its mtr23B deletion and complemented strains

Taxonomy:: Penicillium oxalicum

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

shandong university

Accession:: PRJNA595556
ID:: 595556

Select item 59250412.

Impacts of iron limitation and ocean acidification on the transcriptome of Phaeocystis antarctica

The impacts of iron limitation and ocean acidification on the cellular stoichiometry, photophysiology, and transcriptome of Phaeocystis antarctica

: Project data type: Other

Scope:: Monoisolate

Alfred Wegener Institute for Polar and Marine Research

Accession:: PRJEB35502
ID:: 592504

Select item 57956113.

Tarentola (boettgeri) bischoffi

Diet of Tarentola (boettgeri) bischoffi (classic vs metabarcoding)

Taxonomy:: feces metagenome

: Project data type: Metagenome

Scope:: Environment

Cibio-Inbio

Accession:: PRJNA579561
ID:: 579561

Select item 57614314.

Diacetyl determines plant-bacteria relation via phosphate-dependent modulation of plant immunity

Organism:: Arabidopsis thaliana

Taxonomy:: Arabidopsis thaliana (thale cress)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Shanghai Center for Plant Stress Biology, and CAS Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences

Accession:: PRJNA576143
ID:: 576143

Select item 49907815.

Transcriptomic and gene ontology profiling of the human corneal cell types

Organism:: Homo sapiens

Taxonomy:: Homo sapiens (human)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Cornea Genetics Laboratory, Ophthalmology, Stein Eye Institute, UCLA

Accession:: PRJNA499078
ID:: 499078

Select item 48134016.

An extracellular Argonaute protein mediates export of repeat-associated small RNAs into vesicles in parasitic nematodes

: Project data type: Transcriptome or Gene expression

Scope:: Multispecies

Langebio - Cinvestav

Accession:: PRJNA481340
ID:: 481340

Select item 40074417.

Phosphorus fertilisation x aboveground management

Microbial community and a phosphorus cycling gene respond differently to long-term phosphorus fertilisation under grazing or cutting in grassland soils

: Project data type: Other

Scope:: Monoisolate

UNIVERSITY COLLEGE DUBLIN

Accession:: PRJEB21592
ID:: 400744

Select item 29279418.

Mus musculus

Defining the microglia response during the time course of chronic neurodegeneration

Taxonomy:: Mus musculus (house mouse)

: Project data type: Transcriptome or Gene expression

Scope:: Multiisolate

Head of Division Group (Jean Manson's Lab), Neurobiology Division, The Roslin Institute, The University of Edinburgh

Accession:: PRJNA292794
ID:: 292794

Select item 28475419.

Mus musculus

1,25-Dihydroxyvitamin D3 Controls a Cohort of Vitamin D Receptor Target Genes in the Proximal Intestine That Is Enriched for Calcium Regulating Components (RNA-seq)