Mouse spleen LCM-ATACseq (B and T cell zones) (ID 996891) - BioProject

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Accession: PRJNA996891 ID: 996891

Mouse spleen LCM-ATACseq (B and T cell zones) (house mouse)

See Genome Information for Mus musculus

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This project is a component of the Mouse lung, brain and spleen LCM-ATACseq

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1 additional project is a component of the Mouse lung, brain and spleen LCM-ATACseq.

71406 additional projects are related by organism.

In situ transposition followed by laser capture microdissection was applied to spleen mouse tissue sections to demonstrate feasibility of LCM-based spatial chromatin accessibility analysis of regions of interest. More...

Accession	PRJNA996891; GEO: GSE237824
Data Type	Epigenomics
Scope	Multiisolate
Organism	Mus musculus[Taxonomy ID: 10090] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus; Mus musculus
Publications	Carraro C et al., "Chromatin accessibility profiling of targeted cell populations with laser capture microdissection coupled to ATAC-seq.", Cell Rep Methods, 2023 Oct 23;3(10):100598
Submission	Registration date: 20-Jul-2023 Genomics and Immunoregulation, LIMES (Life and Medical Sciences Center Genomics and Immunoregulation)
Relevance	Model Organism

Project Data:

Resource Name	Number of Links
Sequence data
SRA Experiments	18
Publications
PubMed	1
PMC	1
Other datasets
BioSample	18
GEO DataSets	1

GEO Data Details

Parameter	Value
Data volume, Supplementary Mbytes	1

SRA Data Details

Parameter	Value
Data volume, Gbases	69
Data volume, Mbytes	25491

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Mouse spleen LCM-ATACseq (B and T cell zones) (house mouse)

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