ID 987158 - BioProject

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Accession: PRJNA987158 ID: 987158

Labor-OME project: Characterizing agricultural microbiomes, resistomes, and mobilomes on the skin surface of swine workers and swine

Utilizing a cross-sectional investigation based on a work-phase framework and multi-site composite skin sampling, we performed 16S microbiome and target-enriched shotgun metagenomic sequencing to interrogate the ecosystem topology, composition, and stability of farm worker and swine microbial taxa as well as the composition of resistomes and mobilomes during the course of a work shift in a commercial swine farm in the United States Midwest. More...

Accession	PRJNA987158
Data Type	Raw sequence reads, Metagenome, Metagenomic assembly, Targeted Locus (Loci)
Scope	Multispecies
Grants	"Developing Computational Methods for Surveillance of Antimicrobial Resistant Agents" (Grant ID R01 AI141810, National Institute of Allergy and Infectious Diseases Extramural Activities)
Submission	Registration date: 24-Jun-2023 University of Minnesota
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
SRA Experiments	84
Other datasets
BioSample	255

SRA Data Details

Parameter	Value
Data volume, Gbases	883
Data volume, Tbytes	0.28

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Labor-OME project: Characterizing agricultural microbiomes, resistomes, and mobilomes on the skin surface of swine workers and swine

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