See
Genome Information for Homo sapiens
To identify the functional differences between LR-HPV and HR-HPV
Overall design: Lentiviral strategies were followed to stablish HaCaT cells with constitutive expression of HPV oncogenes, RNAseq experiments were designed to analyze the transcriptome modulations by each of E5, E6 and E7 oncogenes of HPV-16 and -84 in HaCaT cells.
| Accession | PRJNA948450; GEO: GSE228187 |
| Data Type | Transcriptome or Gene expression |
| Scope | Multiisolate |
| Organism | Homo sapiens[Taxonomy ID: 9606] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo; Homo sapiens |
| Publications | Nasiri-Aghdam M et al., "Splicing Characterization and Isoform Switch Events in Human Keratinocytes Carrying Oncogenes from High-Risk HPV-16 and Low-Risk HPV-84.", Int J Mol Sci, 2023 May 6;24(9) |
| Submission | Registration date: 24-Mar-2023
Human Genetics, University of guadalajara |
| Relevance | Medical |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| SRA Experiments | 21 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 21 |
| GEO DataSets | 1 |