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Accession: PRJNA944612 ID: 944612

16S metagenomic analysis of the biogeographic changes associated with Salmonella enterica infection in swine

The aim of this study was to characterize the microbiome of various gastrointestinal locations (small intestine, large intestine, and feces) in swine using 16S sequencing following experimental infection with multiple serovars of Salmonella enterica.
AccessionPRJNA944612
Data TypeRaw sequence reads
ScopeMultispecies
Grants
  • "Investigation of pathogenicity, competitive fitness, and novel methods for rapid diagnosis of S. 4,[5],12:i:-" (Grant ID 16-215, National Pork Board)
SubmissionRegistration date: 14-Mar-2023
Iowa State University College of Veterinary Medicine
RelevanceAgricultural
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments720
Other datasets
BioSample720
SRA Data Details
ParameterValue
Data volume, Gbases9
Data volume, Mbytes5727

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