ID 925922 - BioProject

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Accession: PRJNA925922 ID: 925922

Analysis of resistome in diverse bacteria isolated at the human-environment continuum

The goal of this study was to characterize the resistome carried in commensal bacteria isolated form a variety of niches, including produce, river water (irrigation), and humans (in relationship to food-environment). More...

Accession	PRJNA925922
Data Type	Genome sequencing and assembly
Scope	Multispecies
Submission	Registration date: 20-Jan-2023 University of Wyoming
Relevance	Agricultural

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	108
SRA Experiments	16
Other datasets
BioSample	108
Assembly	108

Assembly details:

Download

Assembly level

Number of Assemblies

Contig

Total

108
108

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_028620805.1	JAQNAE000000000	SAMN32818145	IPG34	Aeromonas hydrophila
GCA_028620795.1	JAQNAC000000000	SAMN32818147	IPG36	Aeromonas hydrophila
GCA_028620615.1	JAQNAF000000000	SAMN32818144	IPG33	Aeromonas hydrophila
GCA_028620555.1	JAQNAD000000000	SAMN32818146	IPG35	Aeromonas hydrophila
GCA_028620865.1	JAQNBG000000000	SAMN32818113	IPG1	Brucella anthropi
GCA_028621035.1	JAQNAJ000000000	SAMN32818139	IPG27	Brucella gallinifaecis
GCA_028620895.1	JAQNAL000000000	SAMN32818137	IPG25	Brucella intermedia
GCA_028620965.1	JAQOMN000000000	SAMN32818135	IPG23	Brucella intermedia
GCA_028620645.1	JAQNAM000000000	SAMN32818136	IPG24	Brucella intermedia
GCA_028621395.1	JAQNBF000000000	SAMN32818115	IPG3	Brucella intermedia
GCA_028620695.1	JAQNAA000000000	SAMN32818155	IPG46	Cedecea lapagei
GCA_028616645.1	JAQMZS000000000	SAMN32818177	IPG69	Enterobacter bugandensis
GCA_028616555.1	JAQMZU000000000	SAMN32818175	IPG67	Enterobacter bugandensis
GCA_028620495.1	JAQMZT000000000	SAMN32818176	IPG68	Enterobacter bugandensis
GCA_028616615.1	JAQOLZ000000000	SAMN32818190	IPG83	Enterobacter cancerogenus
GCA_028616485.1	JAQOLY000000000	SAMN32818214	Bacterial	Enterobacter hormaechei
GCA_029029395.1	JARDWW000000000	SAMN32818207	FPL12	Enterobacter hormaechei
GCA_029360555.1	JARJBK000000000	SAMN32818210	RWL3	Enterobacter hormaechei
GCA_029029415.1	JARDWV000000000	SAMN32818213	RWL6	Enterobacter ludwigii
GCA_028885765.1	JARBGC000000000	SAMN32818212	RWL5	Escherichia coli
GCA_028617035.1	JAQMZI000000000	SAMN32818197	FPL2	Escherichia coli
GCA_028617005.1	JAQMZH000000000	SAMN32818198	FPL3	Escherichia coli
GCA_028616995.1	JAQMZG000000000	SAMN32818199	FPL4	Escherichia coli
GCA_028616915.1	JAQMZF000000000	SAMN32818200	FPL5	Escherichia coli
GCA_028616835.1	JAQMZE000000000	SAMN32818201	FPL6	Escherichia coli
GCA_028616845.1	JAQMZJ000000000	SAMN32818196	FPL1	Escherichia coli
GCA_028616815.1	JAQMZD000000000	SAMN32818202	FPL7	Escherichia coli
GCA_028616795.1	JAQMZB000000000	SAMN32818205	FPL10	Escherichia coli
GCA_028616735.1	JAQMZA000000000	SAMN32818206	FPL11	Escherichia coli
GCA_028616495.1	JAQMZC000000000	SAMN32818203	FPL8	Escherichia coli
GCA_028616385.1	JAQMYX000000000	SAMN32818219	C1048	Escherichia coli
GCA_028616405.1	JAQMYY000000000	SAMN32818218	C1049	Escherichia coli
GCA_028616375.1	JAQMYW000000000	SAMN32818220	C1057	Escherichia coli
GCA_029029375.1	JARDXB000000000	SAMN32818208	RWL1	Escherichia coli
GCA_029029365.1	JARDWY000000000	SAMN32818209	RWL2	Escherichia coli
GCA_029029425.1	JARDWX000000000	SAMN32818211	RWL4	Escherichia coli
GCA_028885795.2	JARBGD000000000	SAMN32818204	FPL9	Klebsiella pneumoniae
GCA_028885785.2	JARBGB000000000	SAMN32818215	KLW2	Klebsiella pneumoniae
GCA_028616445.1	JAQMYZ000000000	SAMN32818216	FE31	Klebsiella pneumoniae
GCA_028616425.1	JAQOLX000000000	SAMN32818217	Bacterial	Klebsiella variicola
GCA_028748085.1	JAQMZN000000000	SAMN32818192	IPG85	Morganella morganii
GCA_028620515.1	JAQMZV000000000	SAMN32818173	IPG65	Morganella morganii
GCA_028620955.1	JAQNAK000000000	SAMN32818138	IPG26	Pantoea ananatis
GCA_028616575.1	JAQMZO000000000	SAMN32818191	IPG84	Proteus vulgaris
GCA_028616635.1	JAQMZP000000000	SAMN32818189	IPG82	Providencia rettgeri
GCA_028621075.1	JAQNAI000000000	SAMN32818140	IPG29	Providencia rettgeri
GCA_028616775.1	JAQMZK000000000	SAMN32818195	IPG89	Providencia rettgeri
GCA_028616895.1	JAQMZL000000000	SAMN32818194	IPG87	Providencia rettgeri
GCA_028617055.1	JAQMZM000000000	SAMN32818193	IPG86	Providencia rettgeri
GCA_029029485.1	JARDXA000000000	SAMN32818171	IPG63	Providencia rettgeri
GCA_029029465.1	JARDWZ000000000	SAMN32818172	IPG64	Providencia rettgeri
GCA_028616935.1	JAQMZR000000000	SAMN32818179	IPG72	Pseudomonas asplenii
GCA_028620735.1	JAQOMJ000000000	SAMN32818170	IPG62	Serratia bockelmannii
GCA_028616665.1	JAQOMH000000000	SAMN32818181	IPG74	Serratia bockelmannii
GCA_028616475.1	JAQOMI000000000	SAMN32818174	IPG66	Serratia bockelmannii
GCA_028620635.1	JAQNAU000000000	SAMN32818127	IPG15	Serratia liquefaciens
GCA_028621055.1	JAQNAN000000000	SAMN32818134	IPG22	Serratia liquefaciens
GCA_028621005.1	JAQNAW000000000	SAMN32818125	IPG13	Serratia liquefaciens
GCA_028620995.1	JAQNBA000000000	SAMN32818121	IPG9	Serratia liquefaciens
GCA_028621145.1	JAQNAQ000000000	SAMN32818131	IPG19	Serratia liquefaciens
GCA_028621135.1	JAQNAX000000000	SAMN32818124	IPG12	Serratia liquefaciens
GCA_028621095.1	JAQNBD000000000	SAMN32818118	IPG6	Serratia liquefaciens
GCA_028621105.1	JAQNAO000000000	SAMN32818133	IPG21	Serratia liquefaciens
GCA_028620935.1	JAQNAV000000000	SAMN32818126	IPG14	Serratia liquefaciens
GCA_028620915.1	JAQNAH000000000	SAMN32818142	IPG31	Serratia liquefaciens
GCA_028620835.1	JAQNAG000000000	SAMN32818143	IPG32	Serratia liquefaciens
GCA_028621345.1	JAQNAY000000000	SAMN32818123	IPG11	Serratia liquefaciens
GCA_028621315.1	JAQNAZ000000000	SAMN32818122	IPG10	Serratia liquefaciens
GCA_028621325.1	JAQNBE000000000	SAMN32818117	IPG5	Serratia liquefaciens
GCA_028621285.1	JAQNAS000000000	SAMN32818129	IPG17	Serratia liquefaciens
GCA_028621275.1	JAQNBC000000000	SAMN32818119	IPG7	Serratia liquefaciens
GCA_028621255.1	JAQNAR000000000	SAMN32818130	IPG18	Serratia liquefaciens
GCA_028621235.1	JAQNAT000000000	SAMN32818128	IPG16	Serratia liquefaciens
GCA_028621205.1	JAQNAP000000000	SAMN32818132	IPG20	Serratia liquefaciens
GCA_028621195.1	JAQNBB000000000	SAMN32818120	IPG8	Serratia liquefaciens
GCA_028620715.1	JAQMZX000000000	SAMN32818162	IPG54	Serratia marcescens
GCA_028620775.1	JAQMZW000000000	SAMN32818169	IPG61	Serratia marcescens
GCA_028620535.1	JAQNAB000000000	SAMN32818154	IPG45	Serratia marcescens
GCA_028620595.1	JAQMZY000000000	SAMN32818159	IPG50	Serratia marcescens
GCA_028620565.1	JAQMZZ000000000	SAMN32818158	IPG49	Serratia marcescens
GCA_028616965.1	JAQOMC000000000	SAMN32818186	IPG79	Serratia marcescens
GCA_028885925.1	JARBGL000000000	SAMN32818161	IPG53	Serratia marcescens
GCA_028885905.1	JARBGJ000000000	SAMN32818164	IPG56	Serratia marcescens
GCA_028885845.1	JARBGH000000000	SAMN32818166	IPG58	Serratia marcescens
GCA_028885735.1	JARBGF000000000	SAMN32818168	IPG60	Serratia marcescens
GCA_028886045.1	JARBGR000000000	SAMN32818148	IPG38	Serratia marcescens
GCA_028886015.1	JARBGO000000000	SAMN32818152	IPG42	Serratia marcescens
GCA_028886005.1	JARBGP000000000	SAMN32818151	IPG41	Serratia marcescens
GCA_028885985.1	JARBGQ000000000	SAMN32818150	IPG40	Serratia marcescens
GCA_028885965.1	JARBGN000000000	SAMN32818153	IPG43	Serratia marcescens
GCA_028885945.1	JARBGM000000000	SAMN32818156	IPG47	Serratia marcescens
GCA_028885865.1	JARBGK000000000	SAMN32818163	IPG55	Serratia marcescens
GCA_028885875.1	JARBGI000000000	SAMN32818165	IPG57	Serratia marcescens
GCA_028885825.1	JARBGG000000000	SAMN32818167	IPG59	Serratia marcescens
GCA_028885725.1	JARBGE000000000	SAMN32818178	IPG70	Serratia marcescens
GCA_028885705.1	JARCFX000000000	SAMN32818160	IPG52	Serratia marcescens
GCA_028616745.1	JAQMZQ000000000	SAMN32818180	IPG73	Serratia odorifera
GCA_028616715.1	JAQOMG000000000	SAMN32818182	IPG75	Serratia ureilytica
GCA_028616695.1	JAQOMF000000000	SAMN32818183	IPG76	Serratia ureilytica
GCA_028616955.1	JAQOMA000000000	SAMN32818188	IPG81	Serratia ureilytica
GCA_028616865.1	JAQOMB000000000	SAMN32818187	IPG80	Serratia ureilytica
GCA_028620675.1	JAQOMK000000000	SAMN32818157	IPG48	Serratia ureilytica
GCA_028620755.1	JAQOML000000000	SAMN32818149	IPG39	Serratia ureilytica
GCA_028620855.1	JAQOMM000000000	SAMN32818141	IPG30	Serratia ureilytica
GCA_028616595.1	JAQOME000000000	SAMN32818184	IPG77	Serratia ureilytica
GCA_028616515.1	JAQOMD000000000	SAMN32818185	IPG78	Serratia ureilytica
GCA_028621175.1	JAQOMP000000000	SAMN32818114	IPG2	Serratia ureilytica
GCA_028621375.1	JAQOMO000000000	SAMN32818116	IPG4	Serratia ureilytica

SRA Data Details

Parameter	Value
Data volume, Gbases	21
Data volume, Mbytes	6991

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Analysis of resistome in diverse bacteria isolated at the human-environment continuum

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