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Accession: PRJNA922994 ID: 922994

Monodelphis domestica (gray short-tailed opossum) genome, mMonDom1

See Genome Information for Monodelphis domestica
The gray short-tailed opossum (Monodelphis domestica) is a small marsupial that inhabits parts of South America. However, it does not have a true pouch. It is a research model as it breeds relatively easily in the laboratory, and neonates can be readily accessed. This gemone is from a captive bred colony, procured and collected by Leah Krubitzer at the University of California Davis and Rebecca Hodge at the Allen Institute for Brain Science, and used to generate a high-quality reference for the Vertebrate Genomes Project (VGP). Sequencing and genome assembly were conducted at the Vertebrate Genomes Lab (VGL) at the Rockefeller University, lead by Olivier Fedrigo and Erich D. Jarvis, with support from Ed Lien and Trygve Bakken at the Allen Institute for Brain Science.
AccessionPRJNA922994
TypeUmbrella project
OrganismMonodelphis domestica[Taxonomy ID: 13616]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Monodelphis; Monodelphis domestica
SubmissionRegistration date: 11-Jan-2023
Vertebrate Genomes Project
RelevanceReference genome
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)72415
WGS master2
Transcript72379
Protein Sequences62272
Publications
PubMed3
PMC3
Other datasets
BioSample1
Assembly2
This project encompasses the following 3 sub-projects:
Project TypeNumber of Projects
Genome sequencing
Highest level of assembly :
Chromosomes
Scaffolds
Total

2
1
3
BioProject
accession
Assembly
level
OrganismTitle
PRJNA915592 ChromosomesMonodelphis domesticaMonodelphis domestica (gray short-tailed opossum) genome, mMonDom1, primary haplotype (Vertebrate Genomes Project)
PRJNA915591 ScaffoldsMonodelphis domesticaMonodelphis domestica (gray short-tailed opossum) genome, mMonDom1, alternate haplotype (Vertebrate Genomes Project)
PRJNA967365 ChromosomesMonodelphis domesticaMonodelphis domestica isolate:mMonDom1 RefSeq Genome sequencing and assembly (NCBI)

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