ID 905045 - BioProject

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Accession: PRJEB57767 ID: 905045

EMG produced TPA metagenomics assembly of PRJNA703330 data set (Rationally designed bacterial consortia to treat chronic immune-mediated colitis and restore intestinal homeostasis).

The Third Party Annotation (TPA) assembly was derived from the primary whole genome shotgun (WGS) data set PRJNA703330, and was assembled with metaSPAdes v3. More...

Accession	PRJEB57767
Data Type	Genome sequencing and assembly
Scope	Monoisolate
Keyword	TPA:assembly
Publications	Mitchell AL et al., "EBI Metagenomics in 2017: enriching the analysis of microbial communities, from sequence reads to assemblies.", Nucleic Acids Res, 2018 Jan 4;46(D1):D726-D735
Submission	Registration date: 24-Nov-2022 EMG

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	5255
WGS master	44
Publications
PubMed	1
PMC	1
Other datasets
BioSample	44
Assembly	44

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

44
44

Assembly	WGS	BioSample	Taxonomy
GCA_947507215.1	CANNOB000000000	SAMEA112181805	Akkermansia muciniphila
GCA_947507335.1	CANNPC000000000	SAMEA112181841	Alistipes finegoldii
GCA_947507495.1	CANNPS000000000	SAMEA112181800	Alistipes putredinis
GCA_947507355.1	CANNPE000000000	SAMEA112181806	Anaerotruncus colihominis
GCA_947507275.1	CANNOW000000000	SAMEA112181829	Bacteroides eggerthii
GCA_947507385.1	CANNPI000000000	SAMEA112181809	Bacteroides ovatus
GCA_947507305.1	CANNOZ000000000	SAMEA112181808	Bacteroides uniformis
GCA_947507475.1	CANNPQ000000000	SAMEA112181838	Bacteroides uniformis
GCA_947507415.1	CANNPK000000000	SAMEA112181801	Bifidobacterium longum
GCA_947507225.1	CANNOE000000000	SAMEA112181817	Eggerthella lenta
GCA_947507165.1	CANNOQ000000000	SAMEA112181820	Eisenbergiella massiliensis
GCA_947507425.1	CANNPL000000000	SAMEA112181823	Enterococcus faecium
GCA_947507235.1	CANNOJ000000000	SAMEA112181807	Escherichia coli
GCA_947507115.1	CANNOG000000000	SAMEA112181818	Flavonifractor plautii
GCA_947507445.1	CANNPN000000000	SAMEA112181836	Gordonibacter pamelaeae
GCA_947507125.1	CANNOO000000000	SAMEA112181819	Holdemania filiformis
GCA_947507265.1	CANNOV000000000	SAMEA112181828	Murimonas intestini
GCA_947507095.1	CANNOT000000000	SAMEA112181831	Parabacteroides distasonis
GCA_947507315.1	CANNPA000000000	SAMEA112181798	Parabacteroides merdae
GCA_947507345.1	CANNPD000000000	SAMEA112181821	[Clostridium] innocuum
GCA_947507285.1	CANNOX000000000	SAMEA112181822	[Clostridium] symbiosum
GCA_947507135.1	CANNOD000000000	SAMEA112181837	uncultured Alistipes sp.
GCA_947507245.1	CANNOI000000000	SAMEA112181840	uncultured Alistipes sp.
GCA_947507195.1	CANNON000000000	SAMEA112181799	uncultured Bacteroides sp.
GCA_947507205.1	CANNOS000000000	SAMEA112181812	uncultured Blautia sp.
GCA_947507465.1	CANNPP000000000	SAMEA112181825	uncultured Butyricicoccus sp.
GCA_947507365.1	CANNPF000000000	SAMEA112181827	uncultured Butyricicoccus sp.
GCA_947507065.1	CANNOP000000000	SAMEA112181833	uncultured Clostridia bacterium
GCA_947507395.1	CANNPH000000000	SAMEA112181815	uncultured Clostridia bacterium
GCA_947507075.1	CANNOL000000000	SAMEA112181824	uncultured Clostridia bacterium
GCA_947507085.1	CANNOK000000000	SAMEA112181814	uncultured Clostridium sp.
GCA_947507375.1	CANNPG000000000	SAMEA112181803	uncultured Collinsella sp.
GCA_947507155.1	CANNOC000000000	SAMEA112181839	uncultured Collinsella sp.
GCA_947507435.1	CANNPM000000000	SAMEA112181802	uncultured Faecalibacterium sp.
GCA_947507185.1	CANNOM000000000	SAMEA112181811	uncultured Firmicutes bacterium
GCA_947507325.1	CANNPB000000000	SAMEA112181813	uncultured Firmicutes bacterium
GCA_947507175.1	CANNOU000000000	SAMEA112181835	uncultured Lachnoclostridium sp.
GCA_947507255.1	CANNOR000000000	SAMEA112181816	uncultured Lachnoclostridium sp.
GCA_947507485.1	CANNPR000000000	SAMEA112181826	uncultured Lachnoclostridium sp.
GCA_947507455.1	CANNPO000000000	SAMEA112181810	uncultured Lachnospiraceae bacterium
GCA_947507145.1	CANNOH000000000	SAMEA112181804	uncultured Phascolarctobacterium sp.
GCA_947507105.1	CANNOF000000000	SAMEA112181830	uncultured Ruminococcus sp.
GCA_947507295.1	CANNOY000000000	SAMEA112181834	uncultured Sutterellaceae bacterium
GCA_947507405.1	CANNPJ000000000	SAMEA112181832	uncultured Turicibacter sp.

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EMG produced TPA metagenomics assembly of PRJNA703330 data set (Rationally designed bacterial consortia to treat chronic immune-mediated colitis and restore intestinal homeostasis).

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