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Accession: PRJNA89149 ID: 89149

Cyprinodon variegatus isolate:N-32 (sheepshead minnow)

Cyprinodon variegatus isolate:N-32 Genome sequencing and assembly

See Genome Information for Cyprinodon variegatus
Sheepshead minnow has been widely used to identify the effects of environmental exposure on gene expression patterns and gene regulatory activities in response to environmental stimuli. More...
AccessionPRJNA89149
Data TypeGenome sequencing and assembly
ScopeMonoisolate
OrganismCyprinodon variegatus[Taxonomy ID: 28743]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Cyprinodontidae; Cyprinodon; Cyprinodon variegatus
Grants
  • "Whole genome assembly resources for aquatic models of human disease" (Grant ID 8 R24 OD011198-02, National Center for Research Resources)
SubmissionRegistration date: 17-Jul-2014
Aquatic Genome Models
- Washington University School of Medicine
- Washington University School of Medince
RelevanceEnvironmental
Locus Tag PrefixUQE
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)4301
WGS master1
SRA Experiments10
Other datasets
BioSample1
Assembly1
SRA Data Details
ParameterValue
Data volume, Gbases232
Data volume, Tbytes0.15
Related RefSeq Project
PRJNA308224 : Cyprinodon variegatus isolate:N-32 RefSeq Genome sequencing

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