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Accession: PRJNA888099 ID: 888099

EMergent Ecosystem Response to ChanGE Biology Integration Institute and IsoGenie: Stordalen Mire

Predictive understanding of ecosystem response to change has become a pressing societal need in the Anthropocene, and requires integration across disciplines, spatial scales, and timeframes. Developing a framework for understanding how different biological systems interact over time is a major challenge in biology. Rapid warming in the Arctic is driving permafrost thaw, and new availability of formerly-frozen soil carbon for cycling and release to the atmosphere, representing a potentially large but poorly constrained accelerant of climate change. The National Science Foundation-funded EMergent Ecosystem Responses to ChanGE (EMERGE) Biology Integration Institute (NSF Award #2022070) aims to develop such a framework by integrating research, training, and high-resolution field and laboratory measurements across 15 scientific subdisciplines–including ecology, physiology, genetics, biogeochemistry, remote sensing, and modeling–across 14 institutions. More...
AccessionPRJNA888099
TypeUmbrella project
Grants
  • "Genes, isotopes, and ecosystem biogeochemistry: dissecting methane flux at the leading edge of global change" (Grant ID DE-SC0004632, Genomic Science Program of the United States Department of Energy Office of Biological and Environmental Research)
SubmissionRegistration date: 7-Oct-2022
Related Resources
RelevanceEnvironmental
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)2891
WGS master1537
Genomic DNA676
SRA Experiments2442
Protein Sequences14113
Publications
PubMed2
PMC1
Other datasets
BioSample4110
Assembly1554
SRA Data Details
ParameterValue
Data volume, Gbases15,763
Data volume, Tbytes5.78
This project encompasses the following 639 sub-projects:
Project TypeNumber of Projects
Genome sequencing
Highest level of assembly :
Scaffolds
SRA or Trace
Total

2
6
8
BioProject
accession
Assembly
level
NameTitle
PRJNA695060 SRA or TraceFunctional capacities of microbial communities to carry out large scale geochemical processes are maintained during ex situ anaerobic incubation.Functional capacities of microbial communities to carry out large scale geochemical processes are maintained during ex situ anaerobic incubation. (IsoGenie)
PRJNA1085467 SRA or TraceImpact of Storage and Extraction Methods on Peat Soil MicrobiomesImpact of Storage and Extraction Methods on Peat Soil Microbiomes (The Ohio State University)
PRJNA825577 SRA or TraceMapping Substrate Utilization Across a Permafrost Thaw GradientMapping Substrate Utilization Across a Permafrost Thaw Gradient (Ohio State University)
PRJNA599435 SRA or TracePlant microbiomes along a permafrost thaw gradientPlant microbiomes along a permafrost thaw gradient (Isogenie)
PRJNA482249 ScaffoldsStordalen Mire Environmental DatasetsStordalen Mire Environmental Datasets (The Ohio State University)
List all 8 'Genome sequencing' projects...
metagenome630
BioProject
accession
OrganismTitle
PRJNA502763peat metagenomePeat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_2 metagenome (DOE Joint Genome Institute)
PRJNA502764peat metagenomePeat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_3 metagenome (DOE Joint Genome Institute)
PRJNA502765peat metagenomePeat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E3_2 metagenome (DOE Joint Genome Institute)
PRJNA502766peat metagenomePeat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_1 metagenome (DOE Joint Genome Institute)
PRJNA502767peat metagenomePeat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_3 metagenome (DOE Joint Genome Institute)
List all 630 'metagenome' projects...
targeted loci1
BioProject
accession
OrganismTitle
PRJNA235935soil metagenomeStordalen mire environmental genomics 2 Targeted Locus (Loci) (Australian Centre for Ecogenomics)

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