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Accession: PRJNA887938 ID: 887938

Pseudomonas brassicacearum - Brassica napus

9 samples (3 replicates x3 control conditions) are just Pseudomonas brassicacearum CDVBN10 transcripts, while the other 3 samples are transcripts from Pseudomonas brassicacearum CDVBN10 (90%) and Brassica napus (10%) Raw sequence reads

This RNA-Seq project aims to unravel the response of Pseudomonas brassicacearum CDVBN10 on the root surface of Brassica napus. More...
AccessionPRJNA887938
Data TypeRaw sequence reads
ScopeMultispecies
Grants
  • "BIOFERTICELLULASER - Role of bacterial cellulases in the transition from free living to root endophytes in rapeseed crops and in the design of efficient biofertilizers" (Grant ID 750795, EUROPEAN UNION’S HORIZON 2020)
SubmissionRegistration date: 7-Oct-2022
Universidad de Salamanca
RelevanceEnvironmental
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments12
Other datasets
BioSample12
SRA Data Details
ParameterValue
Data volume, Gbases171
Data volume, Mbytes53629

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  • Pseudomonas brassicacearum - Brassica napus
    Pseudomonas brassicacearum - Brassica napus
    9 samples (3 replicates x3 control conditions) are just Pseudomonas brassicacearum CDVBN10 transcripts, while the other 3 samples are transcripts from Pseudomonas brassicacearum CDVBN10 (90%) and Brassica napus (10%) Raw sequence reads
    BioProject
  • SP80-3280 growth and maturation field 2
    SP80-3280 growth and maturation field 2
    SP80-3280 growth and maturation field 2
    BioProject

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