ID 886611 - BioProject

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Accession: PRJNA886611 ID: 886611

Wild boars and domestic pigs as a source of probiotics

The project is focused on probiotic bacterial strains isolated from the gastrointestinal tract of wild boars and domestic pigs for subsequent usage as a pigs probiotic in the swine industry.

Accession	PRJNA886611
Data Type	Genome sequencing and assembly
Scope	Multispecies
Publications	Byadgi OV et al., "Comparative genomics of Edwardsiella anguillarum and Edwardsiella piscicida isolated in Taiwan enables the identification of distinctive features and potential virulence factors using Oxford-Nanopore MinION® sequencing.", J Fish Dis, 2023 Apr;46(4):287-297 Moravkova M et al., "Antibiotic Susceptibility, Resistance Gene Determinants and Corresponding Genomic Regions in Lactobacillus amylovorus Isolates Derived from Wild Boars and Domestic Pigs.", Microorganisms, 2022 Dec 30;11(1)
Submission	Registration date: 3-Oct-2022 Veterinary Research Institute
Relevance	Agricultural

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	28
Publications
PubMed	2
PMC	1
Other datasets
BioSample	96
Assembly	28

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

28
28

Assembly	WGS	BioSample	Strain	Taxonomy
GCA_027977705.1	JAOTHC000000000	SAMN31135173	M597AA	Lactobacillus amylovorus
GCA_028308325.1	JAOTHR000000000	SAMN31135188	M1020A	Lactobacillus amylovorus
GCA_028308375.1	JAOTHQ000000000	SAMN31135187	M980A	Lactobacillus amylovorus
GCA_028308365.1	JAOTHP000000000	SAMN31135186	M971A	Lactobacillus amylovorus
GCA_028309125.1	JAOTGR000000000	SAMN31135162	352A	Lactobacillus amylovorus
GCA_028309095.1	JAOTGQ000000000	SAMN31135161	350A	Lactobacillus amylovorus
GCA_028309085.1	JAOTGT000000000	SAMN31135164	374A	Lactobacillus amylovorus
GCA_028309055.1	JAOTGU000000000	SAMN31135165	M356A	Lactobacillus amylovorus
GCA_028309045.1	JAOTGS000000000	SAMN31135163	355A	Lactobacillus amylovorus
GCA_028309025.1	JAOTGX000000000	SAMN31135168	M477A	Lactobacillus amylovorus
GCA_028308995.1	JAOTGW000000000	SAMN31135167	M388A	Lactobacillus amylovorus
GCA_028308985.1	JAOTGV000000000	SAMN31135166	M374A	Lactobacillus amylovorus
GCA_028308945.1	JAOTGZ000000000	SAMN31135170	M492A	Lactobacillus amylovorus
GCA_028308955.1	JAOTGY000000000	SAMN31135169	M490A	Lactobacillus amylovorus
GCA_028308895.1	JAOTHB000000000	SAMN31135172	M583A	Lactobacillus amylovorus
GCA_028308925.1	JAOTHA000000000	SAMN31135171	M581A	Lactobacillus amylovorus
GCA_028308865.1	JAOTHE000000000	SAMN31135175	M624A	Lactobacillus amylovorus
GCA_028308885.1	JAOTHD000000000	SAMN31135174	M597B	Lactobacillus amylovorus
GCA_028308825.1	JAOTHG000000000	SAMN31135177	M696A	Lactobacillus amylovorus
GCA_028308735.1	JAOTHI000000000	SAMN31135179	M702A	Lactobacillus amylovorus
GCA_028308755.1	JAOTHH000000000	SAMN31135178	M700A	Lactobacillus amylovorus
GCA_028308725.1	JAOTHF000000000	SAMN31135176	M668A	Lactobacillus amylovorus
GCA_028308695.1	JAOTHJ000000000	SAMN31135180	M718A	Lactobacillus amylovorus
GCA_028308685.1	JAOTHK000000000	SAMN31135181	M737A	Lactobacillus amylovorus
GCA_028308585.1	JAOTHL000000000	SAMN31135182	M738A	Lactobacillus amylovorus
GCA_028308545.1	JAOTHM000000000	SAMN31135183	M739A	Lactobacillus amylovorus
GCA_028308525.1	JAOTHO000000000	SAMN31135185	M838B	Lactobacillus amylovorus
GCA_028308535.1	JAOTHN000000000	SAMN31135184	M834A	Lactobacillus amylovorus

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Wild boars and domestic pigs as a source of probiotics

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