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Accession: PRJNA880610 ID: 880610

Human gut microbiota Genome sequencing and assembly

Human gut microbiota Genome sequencing and assembly
AccessionPRJNA880610
Data TypeGenome sequencing and assembly
ScopeMultispecies
SubmissionRegistration date: 14-Sep-2022
Icahn School of Medicine
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)2736
Other datasets
BioSample2850
Assembly2736
Assembly details:
Assembly levelNumber of Assemblies
2538
197
2735
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_028322495.1ScaffoldJAQLYC000000000SAMN31322554
1001283st1_E6_1001283B150304_161114
GCA_028322445.1ScaffoldJAQLYB000000000SAMN31322555
D53st1_B3_D53t1_180928
GCA_028322425.1ScaffoldJAQLYD000000000SAMN31322553
1001283st1_D5_1001283B150225_161107
GCA_028322435.1ScaffoldJAQLYE000000000SAMN31322552
1001283st1_D2_1001283B150209_150212
GCA_028322385.1ScaffoldJAQLYA000000000SAMN31322556
D53st1_E10_D53t1_180928
GCA_028322315.1ScaffoldJAQLXZ000000000SAMN31322557
D54st1_D9_D54t1_190329
GCA_028322185.1ScaffoldJAQLXY000000000SAMN31322558
D54st1_G3_D54t1_190329
GCA_028321385.1ScaffoldJAQLYF000000000SAMN31322551
1001283st1_B5_1001283B150210_160208
GCA_040247465.1ScaffoldJBEJHC000000000SAMN31320131
1001713st1_G7_1001713B170131_170501
GCA_040247445.1ScaffoldJBEJHD000000000SAMN31320132
1001136st1_F2_1001136B_160425
GCA_040247425.1ScaffoldJBEJHE000000000SAMN31320133
1001136st1_F3_1001136B_160425
GCA_040247405.1ScaffoldJBEJHH000000000SAMN31320136
1001713st1_B5_1001713B170207_170306
GCA_040247385.1ScaffoldJBEJHG000000000SAMN31320135
1001713st1_B3_1001713B170131_170501
GCA_040247365.1ScaffoldJBEJHF000000000SAMN31320134
1001713st1_A12_1001713B170131_170501
GCA_040247345.1ScaffoldJBEJHI000000000SAMN31320137
RTP21222st1_B2_RTP21222_200807
GCA_040247325.1ScaffoldJBEJHK000000000SAMN31320139
RTP21222st1_D7_RTP21222_200807
GCA_040247305.1ScaffoldJBEJHJ000000000SAMN31320138
RTP21222st1_B7_RTP21222_200807
GCA_040883965.1ScaffoldJBEOMN000000000SAMN31320121
1001283st1_B1_1001287H_170206
GCA_040883925.1ScaffoldJBEOMM000000000SAMN31320120
1001283st1_B1_1001285H_161024
GCA_040883895.1ScaffoldJBEOMP000000000SAMN31320123
1001283st1_C5_1001283B150225_161107
GCA_040883875.1ScaffoldJBEOMR000000000SAMN31320126
1001283st1_D4_1001283B150225_161107
GCA_040883865.1ScaffoldJBEOMO000000000SAMN31320122
1001283st1_C2_1001283B150225_161107
GCA_040883835.1ScaffoldJBEOMS000000000SAMN31320127
1001283st1_G2_1001283B150225_161107
GCA_040883825.1ScaffoldJBEOMQ000000000SAMN31320125
1001283st1_D2_1001283B150225_161107
GCA_040883805.1ScaffoldJBEOMT000000000SAMN31320128
1001283st1_G6_1001283B150225_161107
GCA_040883765.1ScaffoldJBEOMV000000000SAMN31320130
1001283st1_H2_1001283B150304_161114
GCA_040883745.1ScaffoldJBEOMU000000000SAMN31320129
1001283st1_H1_1001285H_161024
GCA_040886535.1ScaffoldJBEOML000000000SAMN31320119
1001262st1_G1_1001262B_160229
GCA_040247285.1ScaffoldJBEJHM000000000SAMN31320146
RTP21311st1_C4_RTP21311_201001
GCA_040247265.1ScaffoldJBEJHL000000000SAMN31320140
1001275st1_D11_1001275B_160808
GCA_040247245.1ScaffoldJBEJHN000000000SAMN31320147
RTP21311st1_F4_RTP21311_201001
GCA_040246545.1ScaffoldJBEJIW000000000SAMN31320187
RTP31036st1_A4_RTP31036_200814
GCA_040247135.1ScaffoldJBEJHT000000000SAMN31320153
1001283st1_C5_1001285H_161024
GCA_040247115.1ScaffoldJBEJHS000000000SAMN31320152
1001283st1_B11_1001285H_161024
GCA_040246595.1ScaffoldJBEJIR000000000SAMN31320182
RTP21221st1_A10_RTP21221_200709
GCA_040246625.1ScaffoldJBEJIU000000000SAMN31320185
RTP21221st1_C6_RTP21222_200807
GCA_040246605.1ScaffoldJBEJIT000000000SAMN31320184
RTP21221st1_C12_RTP21221_200709
GCA_040246575.1ScaffoldJBEJIS000000000SAMN31320183
RTP21221st1_B5_RTP21222_200807
GCA_040246565.1ScaffoldJBEJIV000000000SAMN31320186
RTP21221st1_D4_RTP21221_200709
GCA_040246445.1ScaffoldJBEJJA000000000SAMN31320191
RTP31036st1_E5_RTP31036_200814
GCA_040246485.1ScaffoldJBEJIY000000000SAMN31320189
RTP31036st1_C12_RTP31036_200814
GCA_040246505.1ScaffoldJBEJIX000000000SAMN31320188
RTP31036st1_B5_RTP31036_200814
GCA_040246465.1ScaffoldJBEJIZ000000000SAMN31320190
RTP31036st1_E2_RTP31036_200814
GCA_040247215.1ScaffoldJBEJHO000000000SAMN31320148
1001174st1_D4_1001174B_160307
GCA_040247205.1ScaffoldJBEJHP000000000SAMN31320149
1001174st1_H4_1001174B_160307
GCA_040247185.1ScaffoldJBEJHQ000000000SAMN31320150
1001262st1_D5_1001262B_160229
GCA_040247095.1ScaffoldJBEJHU000000000SAMN31320154
1001283st1_D7_1001295H_181012
GCA_040247125.1ScaffoldJBEJHR000000000SAMN31320151
1001262st1_F4_1001262B_160229
GCA_040247085.1ScaffoldJBEJHX000000000SAMN31320157
1001283st1_F7_1001295H_181012
GCA_040247045.1ScaffoldJBEJHW000000000SAMN31320156
1001283st1_F12_1001285I_161205
GCA_040247035.1ScaffoldJBEJHV000000000SAMN31320155
1001283st1_F12_1001283B150217_161031
GCA_040247025.1ScaffoldJBEJHY000000000SAMN31320158
1001283st1_F9_1001283B150304_161114
GCA_040246985.1ScaffoldJBEJIA000000000SAMN31320165
BSD2780061689st1_E2_BSD2780061689_150309
GCA_040246975.1ScaffoldJBEJHZ000000000SAMN31320164
BSD2780061689st1_D4_BSD2780061689_150309
GCA_040246955.1ScaffoldJBEJIB000000000SAMN31320166
BSD2780120875st1_B2_BSD2780120875b_170604
GCA_040246915.1ScaffoldJBEJIF000000000SAMN31320170
D31st1_F3_D31t1_170403
GCA_040246935.1ScaffoldJBEJIC000000000SAMN31320167
BSD2780120875st1_E2_BSD2780120875b_170604
GCA_040246895.1ScaffoldJBEJIE000000000SAMN31320169
BSD2780120875st1_G4_BSD2780120875_150330
GCA_040246875.1ScaffoldJBEJID000000000SAMN31320168
BSD2780120875st1_F3_BSD2780120875_150330
GCA_040246865.1ContigJBEJIG000000000SAMN31320171
D35st1_A4_D35t1_190705
GCA_040246795.1ScaffoldJBEJIJ000000000SAMN31320174
D6st1_H7_D6t1_180914
GCA_040246805.1ScaffoldJBEJII000000000SAMN31320173
D43st1_A5_D43t1_170807
GCA_040246815.1ContigJBEJIH000000000SAMN31320172
D35st1_F3_D35t1_190705
GCA_040246785.1ScaffoldJBEJIK000000000SAMN31320175
J1101437st1_E5_J1101437_171009
GCA_040246765.1ScaffoldJBEJIL000000000SAMN31320176
RTP21191st1_A12_RTP21191_200730
GCA_040246675.1ScaffoldJBEJIO000000000SAMN31320179
RTP21191st1_F2_RTP21191_200730
GCA_040246715.1ScaffoldJBEJIM000000000SAMN31320177
RTP21191st1_D6_RTP21191_200730
GCA_040246685.1ScaffoldJBEJIQ000000000SAMN31320181
RTP21191st1_G2_RTP21191_200730
GCA_040246695.1ScaffoldJBEJIN000000000SAMN31320178
RTP21191st1_E10_RTP21191_200730
GCA_040246665.1ScaffoldJBEJIP000000000SAMN31320180
RTP21191st1_G12_RTP21191_200730
GCA_040246455.1ScaffoldJBEJJB000000000SAMN31320193
1001262st1_A4_1001262B_160229
GCA_040246405.1ScaffoldJBEJJC000000000SAMN31320194
1001262st1_F3_1001262B_160229
GCA_040246415.1ScaffoldJBEJJD000000000SAMN31320195
1001270st1_G6_1001270J_160509
GCA_040246365.1ScaffoldJBEJJG000000000SAMN31320200
1001283st1_C9_1001283B150209_150212
GCA_040246355.1ScaffoldJBEJJF000000000SAMN31320198
1001283st1_B4_1001283B150225_161107
GCA_040246345.1ScaffoldJBEJJE000000000SAMN31320196
1001283st1_A10_1001283B150225_161107
GCA_040246305.1ScaffoldJBEJJH000000000SAMN31320201
1001283st1_D4_1001283B150304_161114
GCA_040246285.1ContigJBEJJM000000000SAMN31320206
1001713st2_D7_1001713B170221_170320
GCA_040246275.1ScaffoldJBEJJI000000000SAMN31320202
1001283st1_H8_1001283B150217_161031
GCA_040246245.1ScaffoldJBEJJJ000000000SAMN31320203
1001713st1_B4_1001713B170131_170501
GCA_040246255.1ScaffoldJBEJJK000000000SAMN31320204
1001713st1_E9_1001713B170131_170501
GCA_040246225.1ScaffoldJBEJJL000000000SAMN31320205
1001713st1_F2_1001713B170214_170313
GCA_040246205.1ScaffoldJBEJJO000000000SAMN31320208
BSD2780061689st1_H5_BSD2780061689_150309
GCA_040246175.1ScaffoldJBEJJN000000000SAMN31320207
BSD2780061689st1_E1_BSD2780061689_150309
GCA_040246155.1ScaffoldJBEJJQ000000000SAMN31320210
BSD2780120874st1_F9_BSD2780120874_150323
GCA_040246125.1ScaffoldJBEJJP000000000SAMN31320209
BSD2780120874st1_A4_BSD2780120874_150323
GCA_040246135.1ScaffoldJBEJJR000000000SAMN31320211
BSD2780120874st1_H4_BSD2780120875b_170604
GCA_040246105.1ScaffoldJBEJJT000000000SAMN31320213
BSD3448080949st1_F9_BSD3448080949_160606
GCA_040246085.1ScaffoldJBEJJW000000000SAMN31320216
D41st1_C6_D41t1_190614
GCA_040246065.1ScaffoldJBEJJS000000000SAMN31320212
BSD3448080949st1_B1_BSD3448080949_160606
GCA_040246045.1ScaffoldJBEJJU000000000SAMN31320214
BSD3448080949st1_G1_BSD3448080949_160606
GCA_040246025.1ScaffoldJBEJJV000000000SAMN31320215
D40st1_F3_D40t1_170626
GCA_040246005.1ScaffoldJBEJJY000000000SAMN31320218
D54st1_A4_D54t1_190329
GCA_040245985.1ScaffoldJBEJJX000000000SAMN31320217
D46st1_G10_D46t1_190503
GCA_040245965.1ScaffoldJBEJKA000000000SAMN31320220
D54st1_B4_D54t1_190329
GCA_040245945.1ScaffoldJBEJJZ000000000SAMN31320219
D54st1_A9_D54t1_190329
GCA_040245925.1ScaffoldJBEJKB000000000SAMN31320221
D54st1_F12_D54t1_190329
GCA_040245905.1ScaffoldJBEJKD000000000SAMN31320223
D54st1_G9_D54t1_190329
GCA_040245865.1ScaffoldJBEJKC000000000SAMN31320222
D54st1_F3_D54t1_190329
GCA_040245885.1ScaffoldJBEJKE000000000SAMN31320224
J1101437st1_D3_1028SCRN_200821
GCA_040245845.1ScaffoldJBEJKG000000000SAMN31320226
A10_m1001271B151109d1_201121
GCA_040245825.1ScaffoldJBEJKF000000000SAMN31320225
J1101437st1_G10_1028SCRN_200821
GCA_040245785.1ScaffoldJBEJKN000000000SAMN31320233
C4_m1001271B151109d1_201121
GCA_040245805.1ScaffoldJBEJKJ000000000SAMN31320229
A6_m1001271B151109d1_201121
GCA_040245745.1ScaffoldJBEJKI000000000SAMN31320228
A3_m1001271B151109d1_201121
GCA_040245765.1ScaffoldJBEJKH000000000SAMN31320227
A2_m1001271B151109d1_201121
GCA_040245705.1ScaffoldJBEJKL000000000SAMN31320231
B2_m1001271B151109d1_201121
GCA_040245725.1ScaffoldJBEJKK000000000SAMN31320230
B10_m1001271B151109d1_201121
GCA_040245665.1ScaffoldJBEJKR000000000SAMN31320237
E1_m1001271B151109d1_201121
GCA_040245685.1ScaffoldJBEJKM000000000SAMN31320232
C12_m1001271B151109d1_201121
GCA_040245645.1ScaffoldJBEJKP000000000SAMN31320235
D4_m1001271B151109d1_201121
GCA_040245615.1ScaffoldJBEJKO000000000SAMN31320234
D12_m1001271B151109d1_201121
GCA_040245605.1ScaffoldJBEJKQ000000000SAMN31320236
D9_m1001271B151109d1_201121
GCA_040245585.1ScaffoldJBEJKS000000000SAMN31320238
E4_m1001271B151109d1_201121
GCA_040245565.1ScaffoldJBEJKU000000000SAMN31320240
F7_m1001271B151109d1_201121
GCA_040245545.1ScaffoldJBEJKT000000000SAMN31320239
F1_m1001271B151109d1_201121
GCA_040245525.1ScaffoldJBEJKX000000000SAMN31320243
H3_m1001271B151109d1_201121
GCA_040245505.1ScaffoldJBEJKW000000000SAMN31320242
G5_m1001271B151109d1_201121
GCA_040245485.1ScaffoldJBEJKV000000000SAMN31320241
G2_m1001271B151109d1_201121
GCA_040245465.1ScaffoldJBEJKY000000000SAMN31320244
H6_m1001271B151109d1_201121
GCA_040245445.1ScaffoldJBEJKZ000000000SAMN31320245
RTP21191st1_B1_RTP21191_200730
GCA_040245425.1ScaffoldJBEJLB000000000SAMN31320247
RTP21191st1_H11_RTP21191_200730
GCA_040245395.1ScaffoldJBEJLC000000000SAMN31320248
RTP21191st1_H6_RTP21191_200730
GCA_040245385.1ScaffoldJBEJLA000000000SAMN31320246
RTP21191st1_F5_RTP21191_200730
GCA_040245365.1ScaffoldJBEJLD000000000SAMN31320249
RTP21222st1_A5_RTP21222_200807
GCA_040245345.1ScaffoldJBEJLE000000000SAMN31320250
RTP21222st1_A6_RTP21222_200807
GCA_040245325.1ScaffoldJBEJLG000000000SAMN31320257
F1_m1001713B170214d1_201031
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B11_m1001271B151109d1_201121
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RTP21222st1_E5_RTP21222_200807
GCA_040245265.1ScaffoldJBEJLI000000000SAMN31320259
A5_m1001262Bd0_191120
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A7_m1001262Bd0_191120
GCA_040245225.1ScaffoldJBEJLK000000000SAMN31320261
A10_m1001262Bd0_191120
GCA_040245205.1ScaffoldJBEJLN000000000SAMN31320264
C2_m1001262Bd0_191120
GCA_040245185.1ScaffoldJBEJLM000000000SAMN31320263
B11_m1001262Bd0_191120
GCA_040245165.1ScaffoldJBEJLO000000000SAMN31320266
E6_m1001262Bd0_191120
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B1_m1001262Bd0_191120
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G1_m1001262Bd0_191120
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G3_m1001262Bd0_191120
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G10_m1001262Bd0_191120
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G8_m1001262Bd0_191120
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H1_m1001262Bd0_191120
GCA_040245025.1ScaffoldJBEJLR000000000SAMN31320269
G4_m1001262Bd0_191120
GCA_040245005.1ScaffoldJBEJLV000000000SAMN31320273
H3_m1001262Bd0_191120
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H9_m1001262Bd0_191120
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B2_m1001262Bd2_200113
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D7_m1001262Bd2_200113
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D59st1_H11_D59t2_181005
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BSD2780061687st1_A4_BSD2780061687b_171204
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RTP21191st1_D4_RTP21191_200730
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RTP21191st1_A4_RTP21191_200730
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1001713st1_A3_1001713B170131_170501
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1001175st1_D3_1001175B_160314
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D54st1_B7_D54t1_190329
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D54st1_C2_D54t1_190329
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BSD3178071176st1_E5_BSD3178071176_160815
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BSD3178071176st1_G7_BSD3178071176_160815
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D6st1_D9_D6t1_180914
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1001136st1_F12_1001136B_160425
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1001136st1_A7_1001136B_160425
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