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Accession: PRJNA877800 ID: 877800

blaNDM-positive live poultry market sample

Transmission Patterns of Multiple NDM Variants Producing Strains in Animal and Environment Settings from Live Poultry Market
AccessionPRJNA877800
Data TypeGenome sequencing and assembly
ScopeMultispecies
SubmissionRegistration date: 8-Sep-2022
Yangzhou University
RelevanceAgricultural
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)74
WGS master44
Genomic DNA30
Protein Sequences32884
Other datasets
BioSample51
Assembly51
Assembly details:
Assembly levelNumber of Assemblies
7
44
51
AssemblyLevelWGSChrsBioSampleStrainTaxonomy
GCA_025583525.1ContigJAOBVX000000000
SAMN30724596
YZLc5-2
GCA_025583485.1ContigJAOBVV000000000
SAMN30724598
YZLc6-1
GCA_025583465.1ContigJAOBVU000000000
SAMN30724599
YZLc7-1
GCA_025583445.1ContigJAOBVT000000000
SAMN30724600
YZLc18-2
GCA_025583425.1ContigJAOBVS000000000
SAMN30724601
YZLc20-1
GCA_025583385.1ContigJAOBVP000000000
SAMN30724604
YZLc26-1
GCA_025583365.1ContigJAOBVQ000000000
SAMN30724603
YZLc24-1
GCA_025583325.1ContigJAOBVM000000000
SAMN30724607
YZMc9-1
GCA_025583285.1ContigJAOBVN000000000
SAMN30724606
YZMc8-2
GCA_025583245.1ContigJAOBVK000000000
SAMN30724609
YZMd12-2
GCA_025583225.1ContigJAOBVJ000000000
SAMN30724610
YZMp15-1
GCA_025583195.1ContigJAOBVE000000000
SAMN30724615
YZMd20-1
GCA_025583175.1ContigJAOBVH000000000
SAMN30724612
YZMc16-2
GCA_025583165.1ContigJAOBVI000000000
SAMN30724611
YZMc16-1
GCA_025583145.1ContigJAOBVF000000000
SAMN30724614
YZMc19-1
GCA_025583125.1ContigJAOPHX000000000
SAMN30724616
YZMd20-3
GCA_025583095.1ContigJAOBVC000000000
SAMN30724618
YZMd21-2
GCA_025583085.1ContigJAOBVB000000000
SAMN30724619
YZMp22-1
GCA_025583055.1ContigJAOBVD000000000
SAMN30724617
YZMd21-1
GCA_025583045.1ContigJAOBVA000000000
SAMN30724620
YCLc18-1
GCA_025583625.1ContigJAOBWC000000000
SAMN30723153
YZLc1-2
GCA_025583595.1ContigJAOBWA000000000
SAMN30724593
YZLc2-2
GCA_025583545.1ContigJAOBVZ000000000
SAMN30724594
YZLc2-3
GCA_025582975.1ContigJAOBUY000000000
SAMN30724622
YCLc21-2
GCA_025582965.1ContigJAOBUW000000000
SAMN30724624
YCLc22-2
GCA_025582945.1ContigJAOBUV000000000
SAMN30724625
YCLc26-1
GCA_025582895.1ContigJAOBUT000000000
SAMN30724627
YCLc32-2
GCA_025582865.1ContigJAOBUR000000000
SAMN30724629
HALc3-1
GCA_025582835.1ContigJAOBUP000000000
SAMN30724631
HALc4-1
GCA_025582775.1ContigJAOBUL000000000
SAMN30724635
YZLw5-2
GCA_025582685.1ContigJAOBUJ000000000
SAMN30724637
YZLw15-2
GCA_025582655.1ContigJAOPHW000000000
SAMN30724641
YZLcl3-2
GCA_025582625.1ContigJAOBUH000000000
SAMN30724639
YZLw22-1
GCA_025582645.1ContigJAOBUI000000000
SAMN30724638
YZLw18-1
GCA_025583345.2Complete genomeSAMN30724605
YZMc3-1
GCA_025583565.2Complete genomeSAMN30724595
YZLc4-1
GCA_025583295.2Complete genomeSAMN30724613
YZMc17-1
GCA_025583585.2Complete genomeSAMN30724592
YZLc1-3
GCA_025583375.2Complete genomeSAMN30724602
YZLc23-1
GCA_025583265.2Complete genomeSAMN30724608
YZMc10-2
GCA_025582635.1ContigJAOBUG000000000
SAMN30724640
YZLcl3-1
GCA_025582765.1ContigJAOBUM000000000
SAMN30724634
YZLw5-1
GCA_025582745.1ContigJAOBUK000000000
SAMN30724636
YZLw15-1
GCA_025582725.1ContigJAOBUN000000000
SAMN30724633
YZLt9-1
GCA_025582825.1ContigJAOBUQ000000000
SAMN30724630
HALc3-2
GCA_025582785.1ContigJAOBUO000000000
SAMN30724632
HALc4-2
GCA_025582875.1ContigJAOBUS000000000
SAMN30724628
HALc2-2
GCA_025582925.1ContigJAOBUU000000000
SAMN30724626
YCLc26-2
GCA_025582955.1ContigJAOBUX000000000
SAMN30724623
YCLc22-1
GCA_025583025.1ContigJAOBUZ000000000
SAMN30724621
YCLc18-2
GCA_025583505.2Complete genomeSAMN30724597
YZLc5-3

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