Helicobacter (ID 873452) - BioProject

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Accession: PRJDB14140 ID: 873452

Helicobacter

Genomic analysis of gastric non-Helicobacter pylori Helicobacters

Non-Helicobacter pylori Helicobacters (NHPH) are zoonotic bacterial pathogens associated with several gastric diseases, including chronic gastritis, peptic ulcers, and gastric MALT lymphoma, in humans and animals. We performed whole genome sequencing of gastric NHPH isolated for understanding the epidemiology.

Accession	PRJDB14140
Data Type	Genome sequencing and assembly
Scope	Monoisolate
Organism	Helicobacter[Taxonomy ID: 209] Bacteria; Campylobacterota; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Helicobacter
Submission	Registration date: 24-Aug-2022 National Institute of Infectious Diseases

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	2371
WGS master	10
Genomic DNA	10
SRA Experiments	6
Protein Sequences	5463
Other datasets
BioSample	13
Assembly	13

Assembly details:

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Assembly level

Number of Assemblies

Complete genome

Contig

Total

3
10
13

Assembly	WGS	Chrs	BioSample	Strain	Taxonomy
GCA_025998115.1		4	SAMD00519148	type	Helicobacter ailurogastricus
GCA_025998055.1		3	SAMD00519147	type	Helicobacter heilmannii
GCA_027924505.1	BRZW00000000		SAMD00529489	NHP21-4253	Helicobacter suis
GCA_027924485.1	BRZV00000000		SAMD00529488	NHP21-4209	Helicobacter suis
GCA_027924445.1	BRZS00000000		SAMD00529487	NHP20-4259	Helicobacter suis
GCA_027924425.1	BRZU00000000		SAMD00529486	NHP21-4094	Helicobacter suis
GCA_027924385.1	BRZT00000000		SAMD00529485	NHP21-4075	Helicobacter suis
GCA_027924365.1	BRZR00000000		SAMD00529484	NHP20-4250	Helicobacter suis
GCA_027924325.1	BRZQ00000000		SAMD00529483	NHP20-4120	Helicobacter suis
GCA_027924305.1	BRZP00000000		SAMD00529482	NHP20-4118	Helicobacter suis
GCA_027924265.1	BRZO00000000		SAMD00529481	NHP20-4101	Helicobacter suis
GCA_027924245.1	BRZN00000000		SAMD00529480	NHP20-4087	Helicobacter suis
GCA_026000295.1		3	SAMD00532366	HS1	Helicobacter suis HS1

SRA Data Details

Parameter	Value
Data volume, Gbases	1
Data volume, Mbytes	951

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Helicobacter

Genomic analysis of gastric non-Helicobacter pylori Helicobacters

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