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Accession: PRJNA857989 ID: 857989

Champsocephalus

Champsocephalus Genome sequencing and assembly

Raw data for the genome assemblies of the pike icefish (C. esox) and the mackerel icefish (C. gunnari)
AccessionPRJNA857989
Data TypeGenome sequencing and assembly
ScopeMultiisolate
OrganismChampsocephalus[Taxonomy ID: 52236]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Notothenioidei; Channichthyidae; Champsocephalus
PublicationsRivera-Colón AG et al., "Genomics of Secondarily Temperate Adaptation in the Only Non-Antarctic Icefish.", Mol Biol Evol, 2023 Mar 4;40(3)
Grants
  • "Evolutionary Genomic Responses in Antarctic Notothenioid Fishes" (Grant ID 1645087, National Science Foundation)
SubmissionRegistration date: 1-Feb-2024
University of Illinois at Urbana-Champaign
RelevanceEvolution
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)461
WGS master2
SRA Experiments6
Protein Sequences61737
Publications
PubMed1
PMC1
Other datasets
BioSample2
Assembly2
Assembly details:
SRA Data Details
ParameterValue
Data volume, Gbases482
Data volume, Tbytes0.14

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