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Accession: PRJNA844068 ID: 844068

Suncus etruscus (Etruscan shrew) genome, mSunEtr1

See Genome Information for Suncus etruscus
The Etruscan shrew (Suncus etruscus), also known as white-toothed pygmy shrew, is the smallest known extant mammal by mass, weighing only about 1.8 g (0.063 oz) on average. They prefer warm and damp climates and are widely distributed in the belt between 10 and 30 degrees N latitude stretching from Europe and North Africa up to Malaysia (from Wikipedia entry). This sample is from a cell culture line generated by Jessica Antosiewicz-Bourget and Susanne Meyer, from lung fibroblast of an adult male, at the Morgridge Institute for Research, in Madison Wisconsin. The project was coordinated by Yury Bukhman and the sample used to generate a high-quality reference genome for the Vertebrate Genomes Project (VGP). Sequencing and genome assembly were conducted at the Vertebrate Genomes Lab (VGL) at the Rockefeller University, led by Olivier Fedrigo and Erich D. Jarvis.
AccessionPRJNA844068
TypeUmbrella project
OrganismSuncus etruscus[Taxonomy ID: 109475]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Eulipotyphla; Soricidae; Crocidurinae; Suncus; Suncus etruscus
SubmissionRegistration date: 31-May-2022
Vertebrate Genomes Project
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)40624
WGS master2
Transcript40430
SRA Experiments10
Protein Sequences26602
Publications
PubMed2
PMC2
Other datasets
BioSample1
Assembly2
SRA Data Details
ParameterValue
Data volume, Gbases907
Data volume, Tbytes0.29
This project encompasses the following 4 sub-projects:
Project TypeNumber of Projects
Genome sequencing
Highest level of assembly :
Chromosomes
Scaffolds
SRA or Trace
Total

2
1
1
4
BioProject
accession
Assembly
level
NameTitle
PRJNA838699 ChromosomesSuncus etruscusSuncus etruscus (Etruscan shrew) genome, mSunEtr1, primary haplotype (Vertebrate Genomes Project)
PRJNA839355 ScaffoldsSuncus etruscusSuncus etruscus (Etruscan shrew) genome, mSunEtr1, alternate haplotype (Vertebrate Genomes Project)
PRJNA862492 ChromosomesSuncus etruscusSuncus etruscus (Etruscan shrew) genome, mSunEtr1, primary haplotype (NCBI)
PRJNA1008632 SRA or TraceSuncus etruscus (Etruscan shrew) genome, mSunEtr1, sequence dataSuncus etruscus (Etruscan shrew) genome, mSunEtr1, sequence data (G10K)

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