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Genome Information for Falco cherrug
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The saker falcon (Falco cherrug) is a large species of falcons. Its breeding range spans Asia and Europe, and it is a member of the hierofalcon complex. This sample was procured by Farooq Omar Al-Ajli and used to generate a high-quality reference genome in a collaboration between Qatar Falcon Genome Project (QFGP) and Vertebrate Genomes Project (VGP). The project was coordinated by Farooq Al-Ajli as a part of large conservation study (Qatar Falcon Genome Project), and funded by KATARA Cultural Village and Al-Gannas Qatari Society, Qatar. Sequencing and genome assembly were conducted at the Vertebrate Genomes Lab (VGL) by Farooq Omar Al-Ajli at the Rockefeller University, led by Olivier Fedrigo and Erich D. Jarvis. The raw data and assembly are currently under a G10K-VGP publication embargo until removed from this description, following the G10K data use policy at the following URL: https://genome10k.soe.ucsc.edu/data-use-policies/
| Accession | PRJNA844067 |
| Type | Umbrella project |
| Organism | Falco cherrug[Taxonomy ID: 345164] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Falconiformes; Falconidae; Falco; Falco cherrug |
| Submission | Registration date: 31-May-2022
Vertebrate Genomes Project |
| Relevance | Model Organism |
Project Data:
| Resource Name | Number
of Links |
|---|
| Sequence data |
| Nucleotide (total) | 50618 |
| WGS master | 2 |
| Transcript | 50286 |
| SRA Experiments | 8 |
| Protein Sequences | 42949 |
| Publications |
| PubMed | 1 |
| PMC | 1 |
| Other datasets |
| BioSample | 1 |
| Assembly | 2 |
This project encompasses the following 4 sub-projects:
| Project Type | Number of Projects |
Genome sequencingHighest level of assembly : Chromosomes Scaffolds SRA or Trace Total |
2
1
1
4
|
BioProject
accession | Assembly
level | Name | Title |
|---|
| PRJNA842831 | Chromosomes | Falco cherrug | Falco cherrug (Saker falcon) genome, bFalChe1, primary haplotype (Vertebrate Genomes Project) | | PRJNA842830 | Scaffolds | Falco cherrug | Falco cherrug (Saker falcon) genome, bFalChe1, alternate haplotype (Vertebrate Genomes Project) | | PRJNA962077 | Chromosomes | Falco cherrug | Falco cherrug isolate:bFalChe1 RefSeq Genome sequencing and assembly (NCBI) | | PRJNA1008101 | SRA or Trace | Falco cherrug (Saker falcon) genome, bFalChe1, sequence data. | Falco cherrug (Saker falcon) genome, bFalChe1, sequence data. (G10K) |
|