RNA-Seq analysis of Candida glabrata wild-type and... (ID 836887) - BioProject

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Accession: PRJNA836887 ID: 836887

RNA-Seq analysis of Candida glabrata wild-type and Cgset4Δ mutant in the presence and absence of the cell wall targeting echinocandin antifungal drug, caspofungin.

See Genome Information for Nakaseomyces glabratus

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To determine the effect of caspofungin (CSP) treatment and/or loss of the SET domain-containing CgSet4 protein on the transcriptional response of log-phase C. More...

Accession	PRJNA836887; GEO: GSE202654
Data Type	Transcriptome or Gene expression
Scope	Multiisolate
Organism	Nakaseomyces glabratus[Taxonomy ID: 5478] Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Nakaseomyces; Nakaseomyces glabratus
Publications	Bhakt P et al., "The SET-domain protein CgSet4 negatively regulates antifungal drug resistance via the ergosterol biosynthesis transcriptional regulator CgUpc2a.", J Biol Chem, 2022 Oct;298(10):102485
Submission	Registration date: 10-May-2022 Laboratory of Fungal Pathogenesis, Centre for DNA Fingerprinting and Diagnostics
Relevance	Unknown

Project Data:

Resource Name	Number of Links
Sequence data
SRA Experiments	8
Publications
PubMed	1
PMC	1
Other datasets
BioSample	8
GEO DataSets	1

GEO Data Details

Parameter	Value
Data volume, Supplementary Mbytes	2

SRA Data Details

Parameter	Value
Data volume, Gbases	41
Data volume, Mbytes	18214

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RNA-Seq analysis of Candida glabrata wild-type and Cgset4Δ mutant in the presence and absence of the cell wall targeting echinocandin antifungal drug, caspofungin.

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