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Accession: PRJNA813333 ID: 813333

Canadian BioGenome Project (CBP)

Canada possesses significant biodiversity having approximately 80,000 plant and animal species in environments ranging from desert to the arctic. The goal of the Canadian BioGenome Project (CBP) is to generate or collect a high-quality, chromosome-level, annotated reference genome assembly of Canadian eukaryotic species, and to utilize those genomes to address fundamental questions in biology, disease, and conservation. This umbrella BioProject represents the Canadian participation in the Earth BioGenome Project (EBP) (PRJNA533106). The CBP is Genome Canada's flagship Biodiversity project with three regional nodes in Toronto, ON (The Centre for Applied Genomics at The Hospital for Sick Children: https://www.tcag.ca/), Montreal, QC (McGill Genome Centre at McGill University: https://www. More...
AccessionPRJNA813333
TypeUmbrella project
Grants
  • "Large-Scale Applied Research Project (LSARP)" (Grant ID 311CBG, Genome Canada, Genome British Columbia, Genome Alberta, Genome Quebec)
SubmissionRegistration date: 6-Mar-2022
Canada's Michael Smith Genome Sciences Centre
Related Resources
RelevanceEnvironmental
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)68477
WGS master129
Transcript61631
SRA Experiments352
Protein Sequences54583
Publications
PubMed1
Other datasets
BioSample421
Assembly130
SRA Data Details
ParameterValue
Data volume, Gbases24,355
Data volume, Tbytes9.04
This project encompasses the following 322 sub-projects:
Project TypeNumber of Projects
Genome sequencing

2
4
52
17
4
79
BioProject
accession
Assembly
level
NameTitle
PRJNA1137978 ContigsAgriotes ferrugineipennisAgriotes ferrugineipennis (click beetle_af) genome assembly, icAgrFerr1, principal haplotype (Canada's national platform...)
PRJNA1137981 ContigsAgriotes ferrugineipennisAgriotes ferrugineipennis (click beetle_af) genome assembly, icAgrFerr1, alternate haplotype (Canada's national platform...)
PRJNA1079412 SRA or TraceAgriotes lineatusAgriotes lineatus (lined click beetle) genomic and transcriptomic data (Canada's national platform...)
PRJNA1117927 ContigsAgriotes lineatusAgriotes lineatus (lined click beetle) genome assembly, icAgrLine4, principal haplotype (Canada's national platform...)
PRJNA1117928 ContigsAgriotes lineatusAgriotes lineatus (lined click beetle) genome assembly, icAgrLine4, alternate haplotype (Canada's national platform...)
List all 79 'Genome sequencing' projects...
Umbrella project156
BioProject
accession
NameTitle
PRJNA1105588Agriotes ferrugineipennisAgriotes ferrugineipennis (click beetle_af), icAgrFerr1 (Canada's national platform...)
PRJNA1079413Agriotes lineatusAgriotes lineatus (lined click beetle), icAgrLine4 (Canada's national platform...)
PRJNA1105584Agriotes mancusAgriotes mancus (wheat wireworm), icAgrManc1 (Canada's national platform...)
PRJNA1084030Agriotes obscurusAgriotes obscurus (wireworm click beetle), icAgrObsc1 (Canada's national platform...)
PRJNA1105583Agriotes pubescensAgriotes pubescens (click beetle_ap), icAgrPube1 (Canada's national platform...)
List all 156 'Umbrella project' projects...
assembly
Highest level of assembly :
Contigs
No data links
Total

1
86
87
BioProject
accession
Assembly
level
OrganismTitle
PRJNA1153364 No data linksAmmodytes dubiusAmmodytes dubius (northern sand lance) genome assembly, fAmmDub1, alternate haplotype (Canada's national platform...)
PRJNA1153366 No data linksAmmodytes dubiusAmmodytes dubius (northern sand lance) genome assembly, fAmmDub1, principal haplotype (Canada's national platform...)
PRJNA1153345 No data linksAnthonomus rubiAnthonomus rubi (Strawberry blossom weevil) genome assembly, icAntRubi4, alternate haplotype (Canada's national platform...)
PRJNA1153348 No data linksAnthonomus rubiAnthonomus rubi (Strawberry blossom weevil) genome assembly, icAntRubi4, principal haplotype (Canada's national platform...)
PRJNA1117935 No data linksAntigonia caprosAntigonia capros (deepbody boarfish) genome assembly, fAntCap1, principal haplotype (Canada's national platform...)
List all 87 'assembly' projects...

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