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Genome Information for Homo sapiens
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Alopecia areata (AA) is an autoimmune disorder, in which the body's own immune cells attack hair follicels resulting in hair loss. It is a complex genetic disease with 14 associated loci previously identified in our genome-wide association study (GWAS). In the study, we performed the whole-exome sequencing (WES) on 849 AA patients with the aim to identify the novel rare variants in genes contributing to AA susceptibility. We performed gene-collapsing analyses and identified keratin 82 (KRT82 Gene ID: 3888) as the highest associated AA gene in the three rare damaging collapsing models with p<6.7E-07 in one of the models. The KRT82 gene is a hair-specific type II keratin expressed in the hair shaft cuticle during the anagen phase of the hair cycle. We reported the lower expression of... (for more see dbGaP study page.)
Accession | PRJNA768921; dbGaP: phs002632 |
Data Type | Phenotype or Genotype |
Scope | Multiisolate |
Organism | Homo sapiens[Taxonomy ID: 9606] Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo; Homo sapiens |
Submission | Registration date: 5-Oct-2021 COLUMBIA UNIVERSITY HEALTH SCIENCES |
Relevance | Medical |
Project Data:
Resource Name | Number of Links |
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Sequence data |
SRA Experiments | 849 |
Other datasets |
BioSample | 849 |
Genotype and Phenotype (dbGaP) | 1 |