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Accession: PRJNA74593 ID: 74593

Ochotona princeps (American pika)

Ochotona princeps Genome sequencing and assembly

See Genome Information for Ochotona princeps
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This project is a component of the NHGRI Large Scale Sequencing Program for Organismal Sequencing
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9 additional projects are related by organism.
149 additional projects are components of the NHGRI Large Scale Sequencing Program for Organismal Sequencing.
American Pika genome sequencing using Illumina sequencing with multiple library types. The DNA is from a female, Ochotona princeps_07Jul2011
AccessionPRJNA74593
Data TypeGenome sequencing and assembly
ScopeMonoisolate
OrganismOchotona princeps[Taxonomy ID: 9978]
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Ochotonidae; Ochotona; Ochotona princeps
SubmissionRegistration date: 13-Aug-2012
Broad Institute
RelevanceModel Organism
Locus Tag PrefixM5G
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)127327
WGS master1
SRA Experiments12
Other datasets
BioSample2
Assembly1
Assembly details:
AssemblyLevelWGSBioSampleTaxonomy
GCA_000292845.1ScaffoldALIT00000000SAMN00767999
Ochotona princeps
SRA Data Details
ParameterValue
Data volume, Gbases364
Data volume, Tbytes0.23
Related RefSeq Project
PRJNA193497 : Ochotona princeps RefSeq Genome

Supplemental Content

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  • GOLD: Gp0037433 [Genomes On Line Database]
    GOLD: Gp0037433
    Genomes On Line Database

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