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Accession: PRJNA725255 ID: 725255

RNA Sequencing of npr-15(tm12539) and wild type (WT) N2 C elegans

See Genome Information for Caenorhabditis elegans
Purpose: To uncover immune genes and pathways that are modulated by the GPCR/NPR-15 Methods: RNA was extracted from synchronized L4 stage npr-15(tm12539) and WT animals grown at 20 C using Qiagen extraction kits and following standard methods Results: RNA seq analyses shows enriched and signficant upregulated immune, neuropeptide, synaptic signaling and metabolism genes and pathways that are dependent on NPR-15 Conclusions: Our study uncovered NPR-15 to be modulator of the innate immunity in C. More...
AccessionPRJNA725255; GEO: GSE173367
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismCaenorhabditis elegans[Taxonomy ID: 6239]
Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Rhabditida; Rhabditina; Rhabditomorpha; Rhabditoidea; Rhabditidae; Peloderinae; Caenorhabditis; Caenorhabditis elegans
PublicationsOtarigho B et al., "Neuronal NPR-15 modulates molecular and behavioral immune responses via the amphid sensory neuron-intestinal axis in C. elegans.", Elife, 2024 Mar 6;12
SubmissionRegistration date: 26-Apr-2021
Aballay Alejandro Lab, Department of Genetics, The University of Texas MD Anderson Cancer Center
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments6
Publications
PubMed1
PMC1
Other datasets
BioSample6
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes1
SRA Data Details
ParameterValue
Data volume, Gbases28
Data volume, Mbytes8895

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