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Accession: PRJNA699889 ID: 699889

Transcriptome comparison of the irt1-2 mutant (pam42) and the corresponding wild type (Col-0) (thale cress)

See Genome Information for Arabidopsis thaliana
IRT1 is the root high-affinity Fe uptake system. Despite severe Fe deficiency symptoms and reduced Fe levels in the shoots of irt1 mutants, we find that root Fe concentrations are higher in the irt1-2 mutant than in the wild type, unexpectedly. More...
AccessionPRJNA699889; GEO: GSE166269
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismArabidopsis thaliana[Taxonomy ID: 3702]
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana
PublicationsQuintana J et al., "Root-to-shoot iron partitioning in Arabidopsis requires IRON-REGULATED TRANSPORTER1 (IRT1) protein but not its iron(II) transport function.", Plant J, 2022 Feb;109(4):992-1013
SubmissionRegistration date: 5-Feb-2021
RUB University Bochum
NCBI Links
RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Publications
PubMed1
Other datasets
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Spots273720
Data volume, Processed Mbytes4
Data volume, Supplementary Mbytes22

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