PRJNA667083 | A customizable purification assay designed for small-RNA biomarker identification and functional evaluation of circulating exosomes: Exosome Capture by AnTibody of CHoice and Enzymatic Release (exo-CATCHER) | A customizable purification assay designed for small-RNA biomarker identification and functional evaluation of circulating exosomes: Exosome Capture by AnTibody of CHoice and Enzymatic Release (exo-CATCHER) (Laboratory of Medical Transcriptomics,...) |
PRJNA720637 | A human-airway-on-a-chip for the rapid identification of candidate antiviral therapeutics and prophylactics | A human-airway-on-a-chip for the rapid identification of candidate antiviral therapeutics and prophylactics (tenOever Lab, Microbiology,...) |
PRJNA682433 | A novel cell culture system modeling the SARS-CoV-2 life cycle | A novel cell culture system modeling the SARS-CoV-2 life cycle (China Agricultural Universtiy) |
PRJNA704330 | ChIRP-MS RNA-seq during SARS-CoV-2 infection | ChIRP-MS RNA-seq during SARS-CoV-2 infection (Stanford University) |
PRJNA683662 | Clofazimine is a broad-spectrum coronavirus inhibitor that antagonizes SARS-CoV-2 replication in primary human cell culture and hamsters | Clofazimine is a broad-spectrum coronavirus inhibitor that antagonizes SARS-CoV-2 replication in primary human cell culture and hamsters (The University of Hong Kong) |
PRJNA725867 | Discovery and functional interrogation of the virus and host RNA interactome of SARS-CoV-2 proteins [RNA-Seq] | Discovery and functional interrogation of the virus and host RNA interactome of SARS-CoV-2 proteins [RNA-Seq] (UCSD) |
PRJNA735451 | Evaluation of Swab-Seq as a scalable, sensitive assay for community surveillance of SARS-CoV-2 Infection | Evaluation of Swab-Seq as a scalable, sensitive assay for community surveillance of SARS-CoV-2 Infection (Cellular and Molecular Medicine,...) |
PRJNA659731 | FD-seq: Droplet-based RNA sequencing of fixed single cells | FD-seq: Droplet-based RNA sequencing of fixed single cells (Priztker School of Molecular...) |
PRJNA719366 | Global analysis of protein-RNA interactions in SARS-CoV-2 infected cells reveals key regulators of infection | Global analysis of protein-RNA interactions in SARS-CoV-2 infected cells reveals key regulators of infection (Department of Biochemistry,...) |
PRJNA786802 | High throughput sequencing of Vero, A549, CaCO2, and HRT18 cells infected with SARS-CoV2 | High throughput sequencing of Vero, A549, CaCO2, and HRT18 cells infected with SARS-CoV2 (Chungbuk National University) |
PRJNA233943 | Homo Sapiens | Transcriptomic analysis of the Novel Middle East Respiratory Syndrome Coronavirus (MERS-CoV) (IGS) |
PRJNA580021 | Homo sapiens | Transcriptomic Analysis Of circRNAs/miRNAs/mRNAs upon Middle East Respiratory Syndrome Coronavirus (MERS-CoV) infection (HKU) |
PRJNA622520 | Homo sapiens | A Platform to Define Cellular Targets of SARS-COV-2 Infection Using Human Pluripotent Stem Cell-Derived Cells and Organoids (Surgery, Weill Cornell Medical...) |
PRJNA622691 | Homo sapiens | Identification of A Drug Blocking SARS-CoV-2 Infection using Human Pluripotent Stem Cell-derived Colon Organoids (Surgery, Weill Cornell Medical...) |
PRJNA625518 | Homo sapiens | Gene expression profiling of SARS-CoV-1/2 infected human cell lines at bulk and single-cell level (RNA Biology and Posttranscriptional...) |
PRJNA627860 | Homo sapiens | RV infections in asthmatics increase ACE2 expression and stimulate cytokine pathways implicated in COVID19 (Eugene Lab, Department of...) |
PRJNA628628 | Homo sapiens | Bulk RNA sequencing of SARS-CoV and SARS-CoV-2 infected human intestinal organoids (Hubrecht Institute) |
PRJNA629752 | Homo sapiens | Immunophenotyping of COVID-19 and Influenza Underscores the Association of Type I IFN Response in Severe COVID-19 (Biological Sciences, KAIST) |
PRJNA631753 | Homo sapiens | Spectrum of Viral Load and Host Response Seen in Autopsies of SARS-CoV-2 Infected Lungs (Ting Lab, Cancer Center,...) |
PRJNA631969 | Homo sapiens | RNA-Seq of Human iPSC-cardiomyocytes infected with SARS-CoV-2 (Cancer Institute, Cedars...) |
PRJNA633393 | Homo sapiens | A single-cell atlas of the peripheral immune response to severe COVID-19 (Stanford University) |
PRJNA633783 | Homo sapiens | Generation of human bronchial organoids for SARS-CoV-2 research (Human Immunology (Single...) |
PRJNA634167 | Homo sapiens | A safe inhalational treatment prevents SARS–CoV-2 viral replication in human airway epithelial cells. (Pediatrics, Indiana University) |
PRJNA634938 | Homo sapiens | Blocking of the CD80/86 axis as a therapeutic approach to prevent progression to more severe forms of COVID-19 (Rheumatology Research Group,...) |
PRJNA637143 | Homo sapiens | Two distinct immunopathological profiles in lungs of lethal COVID-19 (Institute of Pathology, Cantonal...) |
PRJNA637303 | Homo sapiens | Identification of Lead Drug Candidates for COVID-19 based on Drug Screening Using Human Pluripotent Stem Cell-Derived Cells/Organoids (Weill Cornell Medicine) |
PRJNA639275 | Homo sapiens | Systems biological assessment of immunity to severe and mild COVID-19 infections (Genomics Core, Developmental...) |
PRJNA639580 | Homo sapiens | Imbalance of regulatory and cytotoxic SARS-CoV-2-reactive CD4+ T cells in COVID-19 (Vijayanand Lab, Vaccine Discovery,...) |
PRJNA641908 | Homo sapiens | Global transcriptomic analyses of pluripotent stem cell-derived type II alveolar epithelial-like cells at 1 and 4 days after infection with SARS-CoV-2 (Center for Regenerative Medicine...) |
PRJNA643694 | Homo sapiens | SARS-CoV-2 infection and replication in human fetal and pediatric gastric organoids (ngd) |
PRJNA644579 | Homo sapiens | Severely ill COVID-19 patients display impaired exhaustion features in SARS-CoV-2-reactive CD8+ T cells (Vijayanand Lab, Vaccine Discovery,...) |
PRJNA644625 | Homo sapiens | Primary Human Airway Epithelial Cultures infected with SARS-CoV-2 (Emory University) |
PRJNA646224 | Homo sapiens | Transcriptional and proteomic insights into the host response in fatal COVID-19 cases (Harvard Medical School) |
PRJNA646704 | Homo sapiens | Single cell RNAseq reveal covid19 patient immune response (Stripp Lab, Lung and Regenerative...) |
PRJNA646783 | Homo sapiens | Modulating the transcriptional landscape of SARS-CoV-2 as an effective method for developing antiviral compounds (Ma'ayan Lab, Pharmacological...) |
PRJNA648120 | Homo sapiens | Transcriptional Profiling of Leukocytes in Critically Ill COVID19 Patients (London Regional Genomics...) |
PRJNA648425 | Homo sapiens | Human dendritic cell and macrophage response to SARS-CoV-2 infection (Molecular Microbiology, Washington...) |
PRJNA649019 | Homo sapiens | Identification of Drugs Blocking SARS-CoV-2 Infection using hPSC-derived Lung and Colonic Organoids (Surgery, Weill Cornell Medical...) |
PRJNA655740 | Homo sapiens | Systems biological assessment of immunity to severe and mild COVID-19 infections (Stanford) |
PRJNA658974 | Homo sapiens | SARS-CoV2 infection of iPSC-derived cardiac cells predicts novel cytopathic features in COVID-19 patients (McDevitt, GICD, Gladstone...) |
PRJNA660067 | Homo sapiens | Large-scale Multi-omic Analysis of COVID-19 Severity (Molecular and Cellular Physiology,...) |
PRJNA662965 | Homo sapiens | Human Pluripotent Stem Cell-Derived Neural Cells and Brain Organoids Reveal SARS-CoV-2 Neurotropism Predominates in Choroid Plexus Epithelium (Clinical Research Building,...) |
PRJNA666421 | Homo sapiens | Expression of SARS-CoV-2 receptor ACE2 and coincident host response signature varies by asthma inflammatory phenotype (Ray, Medicine/Pulmonary,...) |
PRJNA418179 | Homo sapiens | Progenitor identification and SARS-CoV-2 infection in human distal lung organoids (Calvin Kuo, Medicine/Hematology,...) |
PRJNA637579 | Homo sapiens | Cardiomyocytes Infected by SARS-CoV-2 Recruit Cardiotoxic Macrophages [scRNA-seq dataset] (Surgery, Weill Cornell Medical...) |
PRJNA637580 | Homo sapiens | Cardiomyocytes Infected by SARS-CoV-2 Recruit Cardiotoxic Macrophages [bulk RNA-seq dataset) (Surgery, Weill Cornell Medical...) |
PRJNA637909 | Homo sapiens | A gateway for SARS-CoV-2 infection in the human olfactory neuroepithelium (Genetics and Evolution, University...) |
PRJNA649976 | Homo sapiens | SARS-CoV-2 infection of primary human lung epithelium for COVID-19 modeling and drug discovery (Stripp Lab, Lung and Regenerative...) |
PRJNA661274 | Homo sapiens | Single-cell sequencing of glioblastoma reveals central nervous system susceptibility to SARS-CoV-2 (Department of Neurosurgery,...) |
PRJNA661567 | Homo sapiens | Single cell resolution of SARS-CoV-2 tropism, antiviral responses, and susceptibility to therapies in primary human airway epithelium (Translational Bioinformatics,...) |
PRJNA669987 | Homo sapiens | Identification of required host factors for SARS-CoV-2 infection in human cells [RNA-seq] (Biology, New York University) |
PRJNA670674 | Homo sapiens | Dysregulation of brain and choroid plexus cell types in severe COVID-19 (Chair for Clinical Bioinformatics,...) |
PRJNA672981 | Homo sapiens | Macrophage expression and prognostic significance of the long pentraxin PTX3 in COVID-19 (Experimental Immunopathology,...) |
PRJNA623281 | Homo sapiens | Identification of Candidate COVID-19 Therapeutics using hPSC-derived Lung Organoids (Surgery, Weill Cornell Medical...) |
PRJNA630421 | Homo sapiens | Persistent viral activity, cytokine storm and lung fibrosis in severe COVID-19 (Shenzhen 3rd People's Hospital) |
PRJNA633281 | Homo sapiens | Modeling COVID-19 with Human Pluripotent Stem Cell-Derived Cells Reveals Synergistic Effects of Anti-inflammatory Macrophages with ACE2 Inhibition Against SARS-CoV-2 (The Chen lab, Pritzker School...) |
PRJNA641797 | Homo sapiens | Bulk RNA sequencing of SARS-CoV-2 infected alveolar type I- and type II like cells (dr. Hans Clevers Lab, Hubrecht...) |
PRJNA659998 | Homo sapiens | AI-guided Discovery of a Paradoxical Immune Response in Fatal COVID-19 (Ileum) (Boolean, Pediatrics, UCSD) |
PRJNA662985 | Homo sapiens | Whole transcriptome sequencing of peripheral blood mononuclear cells from patients with COVID-19 (Key Laboratory of Animal...) |
PRJNA675538 | Homo sapiens | Direct exposure to SARS-CoV-2 and cigarette smoke increases infection severity and alters the stem cell-derived airway repair response (University of California,...) |
PRJNA680711 | Homo sapiens | Infection of human Nasal Epithelial Cells with SARS-CoV-2 and a 382-nt deletion isolate lacking ORF8 reveals similar viral kinetics and host transcriptional profiles (Wang Linfa Lab, Emerging...) |
PRJNA682812 | Homo sapiens | SARS-CoV-2 infects human pluripotent stem cell-derived cardiomyocytes, impairing electrical and mechanical function (Immunology, University of...) |
PRJNA625444 | Homo sapiens | Identification of Lead Drug Candidates for COVID-19 based on Drug Screening Using Human Pluripotent Stem Cell-Derived Cells/Organoids (Weill Cornell Medicine) |
PRJNA625446 | Homo sapiens | Identification of Drugs Blocking SARS-CoV-2 Infection using Human Pluripotent Stem Cell-derived Colonic Organoids (Weill Cornell Medicine) |
PRJNA643420 | Homo sapiens | Immunologic characterization of COVID-19 patients with hematologic cancer: biologic and clinical significance (Clínica Universidad de Navarra...) |
PRJNA677825 | Homo sapiens | Androgen Regulates SARS-CoV-2 Receptor Levels and Is Associated with Severe COVID-19 Symptoms in Men [scRNA-Seq] (Biochemistry and Biophysics,...) |
PRJNA677826 | Homo sapiens | Androgen Regulates SARS-CoV-2 Receptor Levels and Is Associated with Severe COVID-19 Symptoms in Men [bulk RNA-Seq] (Biochemistry and Biophysics,...) |
PRJNA679331 | Homo sapiens | Longitudinal multi-omics identifies responses of megakaryocytes, erythroid cells and plasmablasts as hallmarks of severe COVID-19 trajectories [sequencing] (Cell biology Lab, Institute...) |
PRJNA680539 | Homo sapiens | Low avidity T cell responses to SARS-CoV-2 in unexposed individuals and severe COVID-19 (Neuroimmunology, Institute...) |
PRJNA688216 | Homo sapiens | Combined heart-lung transplant for COVID-19 (Kropski, Medicine, Vanderbilt...) |
PRJNA688734 | Homo sapiens | Response to SARS-CoV-2 infection in cornea, limbus and sclera from human donors (tenOever lab, Microbiology,...) |
PRJNA690513 | Homo sapiens | Outcome of SARS-CoV-2 infection is linked to MAIT cell activation and cytotoxicity (Institut Cochin) |
PRJNA691164 | Homo sapiens | Single-cell RNA sequencing of human nasal swab from COVID-19 patient (Center for Vascular Research,...) |
PRJNA679264 | Homo sapiens | Dysregulated transcriptional responses to SARS-CoV-2 in the periphery support novel diagnostic approaches (Duke University) |
PRJNA688684 | Homo sapiens | Global Absence and Targeting of Protective Immune States in Severe COVID-19 (Data Sciences CoLab, CoLabs,...) |
PRJNA692987 | Homo sapiens | BRD2 inhibition blocks SARS-CoV-2 infection by reducing transcription of the host cell receptor ACE2 (SUSTech) |
PRJNA693539 | Homo sapiens | Adult Stem Cell-derived Complete Lung Organoid Models Emulate Lung Disease in COVID-19 (Boolean, Pediatrics, UCSD) |
PRJNA694646 | Homo sapiens | The expansion of unconventional CD56dim CD16neg cells is a hallmark of the natural killer cell population in COVID-19 (LIID, KAIST) |
PRJNA661032 | Homo sapiens | Deciphering the state of immune silence in fatal COVID-19 patients (Immunology, Weizmann Institute...) |
PRJNA670242 | Homo sapiens | SARS-CoV-2 infection of human pancreatic islets (Ulm University) |
PRJNA686659 | Homo sapiens | Transcriptome analysis of SARS-CoV-2 infected H522 human lung adenocarcinoma cells (Washington University School...) |
PRJNA694670 | Homo sapiens | Single cell sequencing of whole eye organoids to identify ocular cell susceptible to infection with SARS-CoV2 and the viral response in infected cells (Ichan School of Medicine...) |
PRJNA694911 | Homo sapiens | Virus-induced senescence is a central pathogenic principle and therapeutic target in COVID-19 disease (Hematology, Oncology, Tumorimmunology,...) |
PRJNA663837 | Homo sapiens | In severe COVID-19, SARS-CoV-2 induces a chronic, TGF-β-dominated adaptive immune response (Activated B cells, set 1) (Deutsches Rheuma-Forschungszentrum) |
PRJNA663838 | Homo sapiens | In severe COVID-19, SARS-CoV-2 induces a chronic, TGF-β-dominated adaptive immune response (Activated B cells, Set 2) (Deutsches Rheuma-Forschungszentrum) |
PRJNA663839 | Homo sapiens | In severe COVID-19, SARS-CoV-2 induces a chronic, TGF-β-dominated adaptive immune response (Measles-reactive T cells) (Deutsches Rheuma-Forschungszentrum) |
PRJNA663840 | Homo sapiens | In severe COVID-19, SARS-CoV-2 induces a chronic, TGF-β-dominated adaptive immune response (Bronchoalveolar lavage) (Deutsches Rheuma-Forschungszentrum) |
PRJNA699856 | Homo sapiens | Transcriptomic characteristics and impaired immune function of patients who retest positive for SARS-CoV-2 RNA (University of Science and...) |
PRJNA645534 | Homo sapiens | Expression profiling of SARS-CoV-2 infected patients by RNA-seq (Basic and Applied Research...) |
PRJNA680293 | Homo sapiens | Time-resolved Systems Immunology Reveals a Late Juncture Linked to Fatal COVID-19 (Immunobiology, Yale School...) |
PRJNA676120 | Homo sapiens | Pathological effects of SARS-CoV-2 on hESC-derived peripheral neurons (Pathology, Department of...) |
PRJNA698540 | Homo sapiens | Deleterious effects of SARS-CoV-2 infection on human pancreatic cells (Sareen lab, Board of Governors...) |
PRJNA701930 | Homo sapiens | Single-cell longitudinal analysis of SARS-CoV-2 infection in human airway epithelium identifies target cells, alterations in gene expression and cell state changes (Clinic Building 407A, Laboratory...) |
PRJNA702537 | Homo sapiens | Single Cell RNA-Seq of PBMC from COVID-19 patients and Control subjects (Johns Hopkins SOM) |
PRJNA702558 | Homo sapiens | PolyA RNA-seq from whole blood of Sars-COV2-negative and -positive subjects (Pharmacology & Linda Crnic...) |
PRJNA703046 | Homo sapiens | Host-virus chimeric events in SARS-CoV2 infected cells are infrequent and artifactual (Purdue university) |
PRJNA704706 | Homo sapiens | SARS-CoV-2 spike protein interacts with and activates TLR4 (You Lab, Institute of Systems...) |
PRJNA668169 | Homo sapiens | A genome-wide RNAi screen to identify human factors essential for SARS-CoV-2 infection (The University of Hong Kong) |
PRJNA690013 | Homo sapiens | Frontal Cortex whole transcriptome sequencing in COVID-19 elderly patients (Genomic and Post Genomic...) |
PRJNA707445 | Homo sapiens | Longitudinal single-cell epitope and RNA-sequencing reveals the immunological impact of type 1 interferon autoantibodies in critical COVID-19 (Ye, Graduate Division, University...) |
PRJNA658984 | Homo sapiens | Single-cell transcriptomics of human intestinal organoids infected with SARS-CoV-2 (Alexandrov team, Structural...) |
PRJNA663975 | Homo sapiens | Human primary brain microvascular endothelial cells transcriptome with/without SARS-CoV-2 infection (Huazhong Agricultural University) |
PRJNA682407 | Homo sapiens | Role of Top1 and Genome structure in SARS-CoV-2 infection [RNA-Seq human] (Ivan Marazzi, Microbiology,...) |
PRJNA688513 | Homo sapiens | A single-cell and spatial atlas of autopsy tissues reveals pathology and cellular targets of SARS-CoV-2 [gene expression levels] (Vlachos Lab, Pathology, Beth...) |
PRJNA701047 | Homo sapiens | Immune dysregulation and autoreactivity correlate with disease severity in SARS-CoV-2-associated multisystem inflammatory syndrome in children (Yale University) |
PRJNA715450 | Homo sapiens | Host transcriptome response to SARS-CoV2 infection (Diabetes Complications and...) |
PRJNA715767 | Homo sapiens | hPSC-derived cells to model Macrophage-mediated inflammation in COVID19 Hearts (Surgery, Weill Cornell Medical...) |
PRJNA716830 | Homo sapiens | Identification and characterization of a SARS-CoV-2 specific CD8 T cell response with immunodominant features (Molecular Oncology & Immunology,...) |
PRJNA719365 | Homo sapiens | SARS-CoV-2 infection in pregnancy is associated with robust inflammatory response at the maternal-fetal interface (Ecology and Evolutionary...) |
PRJNA720088 | Homo sapiens | Single-cell RNA-seq of human peripheral blood mononuclear cells in COVID-19 (Duke University) |
PRJNA721668 | Homo sapiens | SARS-CoV-2 infection in pregnancy is associated with robust inflammatory response at the maternal-fetal interface (Immunobiology, Yale School...) |
PRJNA649786 | Homo sapiens | Whole blood transcriptome analysis reveals SARS-CoV-2 ORF8 as a potential therapeutic and vaccine target (Singapore Immunology Network...) |
PRJNA667939 | Homo sapiens | iPSC-derived Human Intestinal Organoids are permissive to SARS-CoV-2 infection (Center for Regenerative Medicine...) |
PRJNA688321 | Homo sapiens | Transcriptome analysis of Severe acute respiratory syndrome coronavirus 2(SARS-CoV-2)-infected and Influenza A/H1N1-infected nasal turbinate and lung tissues (Clinical Virology Unit, Dept....) |
PRJNA700863 | Homo sapiens | Asymptomatic COVID-19: disease tolerance with efficient anti-viral immunity against SARS-CoV-2 (Singapore Immunology Network...) |
PRJNA702533 | Homo sapiens | Modeling SARS-CoV-2 infection and its individual differences with ACE2-expressing human iPS cells (Center for iPS Cell Research...) |
PRJNA669693 | Homo sapiens | scRNA-seq analysis of SARS-CoV-2 infected human islets (Surgery, Weill Cornell Medical...) |
PRJNA682211 | Homo sapiens | Immune transcriptomes of highly exposed SARS-CoV-2 asymptomatic seropositive versus seronegative individuals from the Ischgl community (Laboratory of Genetics and...) |
PRJNA690255 | Homo sapiens | Distinct B cell repertoires characterize patients with mild and severe COVID-19 [GEX] (Neurology, Icahn School of...) |
PRJNA655952 | Homo sapiens | Immunological Biomarkers of Fatal COVID-19: A Study of 868 Patients (Clínica Universidad de Navarra...) |
PRJNA716306 | Homo sapiens | scRNAseq of Antigen Presenting Cells in severe COVID-19 patients (U976, Human Immunology Pathophysiology...) |
PRJNA719419 | Homo sapiens | Study of a novel aspect of viral-host interaction upon SARS-CoV-2 infection using bulk RNA-seq (Whitehead Institute) |
PRJNA722734 | Homo sapiens | Natural Mucosal Barriers and COVID-19 in Children (Albert Einstein College of...) |
PRJNA636173 | Homo sapiens | Experimental and natural evidence of SARS-CoV-2 infection-induced activation of type I interferon responses (Biochemistry & Biomedical...) |
PRJNA694174 | Homo sapiens | Transcriptional analysis of SARS-CoV-2 specific CD4 T cells (SUNY Upstate Medical University) |
PRJNA726809 | Homo sapiens | ORAI1 establishes resistance to SARS-CoV-2 infection by regulating tonic type I interferon levels (Ecology and Evolutionary...) |
PRJNA731026 | Homo sapiens | A multi-omics investigation on the composition and physiological function of extracellular vesicles along the temporal trajectory of COVID-19 (Institute of Genetics and...) |
PRJNA731518 | Homo sapiens | RNAseq analysis of PS+ vs PS- non-naive CD8 T cells sorted from peripheral blood of COVID-19 patients (Institute for Immunology,...) |
PRJNA718288 | Homo sapiens | Comparative Transcriptomic and Molecular Pathway Analyses of HL-CZ Human Pro-Monocytic Cells Expressing SARS-CoV-2 Spike S1, S2, NP, NSP15 and NSP16 Genes (Microbiology & Immunology,...) |
PRJNA718349 | Homo sapiens | Whole blood transciptome analysis in severe Covid-19 patients and healthy donors (INSERM U955_VRI) |
PRJNA733520 | Homo sapiens | Characterization of the SARS-CoV-2 Host Response in Primary Human Airway Epithelial Cells from Aged Individuals (Genes & Human Disease Research...) |
PRJNA725825 | Homo sapiens | Next generation sequencing transcriptome analysis of patient-derived macrophages stimulated with SARS-CoV-2 protein (University Hospital of Cologne) |
PRJNA663578 | Homo sapiens | Scottish Colorectal Cancer Vitamin D Intervention Study (SCoViDS) [RNA-seq] (Bioinformatics Analysis Core,...) |
PRJNA690931 | Homo sapiens | The landscape of human brain immune response in patients with severe COVID-19 (Functional Neurogenomics,...) |
PRJNA738888 | Homo sapiens | Identification of immune correlates of fatal outcomes in critically ill COVID-19 patients (Goulder, Paediatrics, University...) |
PRJNA735729 | Homo sapiens | RNA sequencing of blood monocyte subsets in COVID patients (Pathology and Immunology,...) |
PRJNA740323 | Homo sapiens | Rapid, scalable assessment of SARS-CoV-2 cellular immunity by whole-blood PCR (Icahn School of Medicine...) |
PRJNA741195 | Homo sapiens | Severe COVID-19 is Characterized by an Impaired Type I Interferon Response and Elevated Levels of Arginase Producing Granulocytic Myeloid Derived Suppressor Cells (LCRC 909, Cancer Center/Interdiscipliary...) |
PRJNA675891 | Homo sapiens | Next Generation Sequencing Analysis of Transcriptomes in maculopapular drug rash with COVID-19 infection (Functional Genomics Center...) |
PRJNA707223 | Homo sapiens | Peripheral blood gene expression according to IFIH1 rs1990760 variants in critically-ill COVID-19 patients (Laboratorio de Investigación...) |
PRJNA736848 | Homo sapiens | Effects of steroids on peripheral blood gene expression in COVID-19 patients according to rs1990760 variants (Laboratorio de Investigación...) |
PRJNA702763 | Homo sapiens | A monocyte/dendritic cell molecular signature of SARS-CoV2-related multisystem inflammatory syndrome in children (MIS-C) with severe myocarditis [Bulk RNAseq] (Institut Imagine) |
PRJNA702765 | Homo sapiens | A monocyte/dendritic cell molecular signature of SARS-CoV2-related multisystem inflammatory syndrome in children (MIS-C) with severe myocarditis [Single cell RNAseq] (Institut Imagine) |
PRJNA743862 | Homo sapiens | RNAseq analysis of human CD4+ regulatory Tregs and Tconvs in COVID-19 and healthy donors isolated from peripheral blood. (CBDM, Microbiology and Immunobiology,...) |
PRJNA745903 | Homo sapiens | SARS-CoV-2 infects the brain vasculature in COVID-19 patients and a hiPSC-derived model of the blood-brain barrier (ScreeningPort, Frauenhofer...) |
PRJNA645842 | Homo sapiens | RNA-seq on CD16Int versus CD16High in severe COVID-19 patients (KY INBRE Bioinformatics Core,...) |
PRJNA744408 | Homo sapiens | Transcriptome analysis of PBMCs reveals distinct immune response in the asymptomatic and re-detectable positive COVID-19 patients (College of Bioinformatics) |
PRJNA750442 | Homo sapiens | Convalescent COVID-19 patients without comorbidities display similar immunophenotypes over time despite divergent disease severities (Biomedical Informatics, Graz...) |
PRJNA766554 | Homo sapiens | Investigation of human peripheral T cells responsive to SARS-CoV-2 antigens (Osaka University) |
PRJNA756941 | Homo sapiens | The interferon landscape along the respiratory tract impacts the severity of COVID-19 (Pediatrics/Immunology, Boston...) |
PRJNA729748 | Homo sapiens | Switching of OAS1 splicing isoforms mitigates SARS-CoV-2 infection (Kindai University) |
PRJNA701206 | Homo sapiens | Deciphering the host transcriptional response to SARS-CoV-2 infection (Bioinformatics, Center for...) |
PRJNA755713 | Homo sapiens | Molecular Profiling of COVID-19 Autopsies Uncovers Novel Disease Mechanisms [scRNA-Seq] (Genetics and Genomic Sciences,...) |
PRJNA741686 | Homo sapiens | Baseline signatures associated with clinical, virologic, and immunologic outcomes in patients with mild to moderate COVID-19 (University of California...) |
PRJNA736408 | Homo sapiens | Microvascular Endothelial Cell RNA-Seq: Treatment with Platelet Releasate from COVID-19 & Control Donors (Ruggles Lab, School of Medicine,...) |
PRJNA717662 | Homo sapiens | Long-term perturbation of the blood transcriptome months after SARS-CoV-2 infection. (SAHMRI) |
PRJNA756893 | Homo sapiens | Ab Initio Design of Amphipathic-Symmetric Peptides against SARS-CoV-2 (Zhejiang University) |
PRJNA764429 | Homo sapiens | SARS-CoV-2 infection and replication in human gastric organoids (ngd) |
PRJNA736410 | Homo sapiens | Assessment of the platelet transcriptome in patients with COVID-19 versus controls (Ruggles Lab, School of Medicine,...) |
PRJNA753775 | Homo sapiens | Comparison of viral RNA–host protein interactomes across pathogenic RNA viruses informs rapid antiviral drug discovery for SARS-CoV-2 (Tsinghua University) |
PRJNA707200 | Homo sapiens | Maturation signatures of conventional dendritic cell subtypes in COVID-19 suggest direct viral sensing (Università di Milano-Bicocca) |
PRJNA753794 | Homo sapiens | HIV infection drives interferon signaling within intestinal SARS-CoV-2 susceptible target cells (Henrik Kloverpris Lab, Immunology...) |
PRJNA735694 | Homo sapiens | Human nasal epithelial and immune cell responses to SARS-CoV-2 versus influenza A virus (Garber Lab, Program in Bioinformatics...) |
PRJNA765795 | Homo sapiens | Highly efficient SARS-CoV-2 infection of human cardiomyocytes: spike protein-mediated cell fusion and its inhibition (Robero Cattaneo, Molecular...) |
PRJNA663977 | Homo sapiens | Human neuroblastoma cells (SK-N-SH) transcriptome with/without SARS-CoV-2 infection (Huazhong Agricultural University) |
PRJNA662785 | Homo sapiens | Dexamethasone modulates immature neutrophils and interferon programming in severe COVID-19 (Biernaskie Lab, Comparative...) |
PRJNA705602 | Homo sapiens | Genome-wide PBMCs Profiling Reveals Early Detection of Immunothrombotic Dysregulation in COVID-19 based on Blood Routine Test: A Multi-Center Retrospective Study of 1219 Patients (School of Public Health,Southern...) |
PRJNA661222 | Homo sapiens | Next Generation Sequencing Quantitative Analysis on COVID-19 Kidney tissue (Bioinfomatics, Renal, Icahn...) |
PRJNA691950 | Homo sapiens | Antihypertensive drug treatment and susceptibility to SARS-CoV-2 infection in human PSC-derived cardiomyocytes and primary endothelial cells (Churko Lab, CMM, University...) |
PRJNA692496 | Homo sapiens | Single-cell analysis identifies shared and distinct immune features of COVID-19, Influenza and other community-acquired pneumonia (Academic Medical Center) |
PRJNA725183 | Homo sapiens | Blood transcriptomes of anti-SARS-CoV2 antibody positive healthy individuals with prior asymptomatic versus clinical infection (National and Kapodistrian...) |
PRJNA755712 | Homo sapiens | Molecular Profiling of COVID-19 Autopsies Uncovers Novel Disease Mechanisms [RNA-Seq] (Genetics and Genomic Sciences,...) |
PRJNA699562 | Homo sapiens | Understanding COVID-19 in children and adults (Department of Pathology and...) |
PRJNA736063 | Homo sapiens | Circadian regulation of SARS-CoV-2 infection in lung epithelial cells (University of Oxford) |
PRJNA731457 | Homo sapiens | SARS-CoV-2 Infection Causes Dopaminergic Neuron Senescence (Surgery, Weill Cornell Medical...) |
PRJNA764083 | Homo sapiens | Untimely TGFβ responses in COVID-19 limit antiviral functions of NK cells (Deutsches Rheuma-Forschungszentrum) |
PRJNA722046 | Homo sapiens | Identification of driver genes for severe forms of COVID-19 in a deeply phenotyped young patient cohort (AI Lab, GAIRI, Genuity Science) |
PRJNA774966 | Homo sapiens | A virus-specific monocyte inflammatory phenotype is induced by SARS-CoV2 at the immune-epithelial interface (CBDM, Microbiology and Immunobiology,...) |
PRJNA773942 | Homo sapiens | Baricitinib attenuates the proinflammatory phase1 of COVID-19 driven by lung-infiltrating monocytes (Rabindra Tirouvanziam, Pediatrics,...) |
PRJNA648991 | Homo sapiens | Single-Cell Omics Reveals Dyssynchrony of the Innate and Adaptive Immune System in Progressive COVID-19 [single-cell RNA-seq] (Kleinstein, Pathology, Yale...) |
PRJNA778712 | Homo sapiens | RNA-seq of SIRT5-KO cells infected with SARS-CoV-2 (Buck institute) |
PRJNA769665 | Homo sapiens | Maternal-Fetal Immune Responses in Pregnant Women Infected with SARS-CoV-2 (Bioinformatics and Computational...) |
PRJNA736437 | Homo sapiens | Cardiometabolic MicroRNAs are Associated with severeerity and 28-Day Intensive Care Unit Mortality in COVID-19 Patients (TAmiRNA GmbH) |
PRJNA765050 | Homo sapiens | Enteric coronavirus infection and treatment modeled with an immunocompetent human intestine-on-a-chip (MIT) |
PRJNA758292 | Homo sapiens | Postmortem high-dimensional immune profiling of severe COVID-19 patients reveals distinct patterns of immunosuppression and immunoactivation [RNA-seq] (Department of Pathology,...) |
PRJNA681515 | Homo sapiens | A virus-derived microRNA targets immune response genes during SARS-CoV-2 infection [RNA-seq] (Mechanisms of Epigenetic...) |
PRJNA681510 | Homo sapiens | A virus-derived microRNA targets immune response genes during SARS-CoV-2 infection [sRNA-seq] (Mechanisms of Epigenetic...) |
PRJNA720624 | Homo sapiens | SARS-CoV-2 infection-induced human B cells (Medicine, University of Chicago) |
PRJNA783299 | Homo sapiens | Small RNA-seq analysis of serum miRNAs in patients with severe COVID-19 (Department of Clinical and...) |
PRJNA781955 | Homo sapiens | Vascular Damage, Thromboinflammation, Plasmablast Activation, T-Cell Dysregulation and Pathological Histiocytic Response in Pulmonary Draining Lymph Nodes of COVID-19 (Institute of Medical Genetics...) |
PRJNA783881 | Homo sapiens | Differential interferon-α immune signatures prevent SARS-CoV-2 infection (Molecular & Medical Virology,...) |
PRJNA748753 | Homo sapiens | Single-cell RNA sequencing of urinary cells from patients with COVID-19 reveals distinct cellular diversity in AKI (University of Alabama at...) |
PRJNA764084 | Homo sapiens | Single cell RNA sequencing and TCR repertoire analysis of MIS-C affected patients versus healthy controls and severe adult COVID-19 (VIB Inflammation Research...) |
PRJNA770335 | Homo sapiens | Differential effect of SARS-CoV-2 spike glycoprotein 1 on human bronchial and alveolar lung mucosa models: Implications on pathogenicity. (Institute of Experimental...) |
PRJNA718085 | Homo sapiens | SARS-CoV-2 Nucleocapsid protein attenuates stress granule formation and interacts directly with mRNAs to impair host stress response (RNA-Seq) (University of Toronto) |
PRJNA687221 | Homo sapiens | Self-organized stem cell-derived human lung buds with proximo-distal patterning and novel targets of SARS-CoV-2 (Brivanlou lab, The Rockefeller...) |
PRJNA767057 | Homo sapiens | Profilling of viral and host transcriptome in SARS-CoV-2 infected A549-ACE2 cells with VIC or B.1.1.7 strains. (University of Oxford) |
PRJNA769125 | Homo sapiens | Single Nuclei RNA Sequencing Analysis of Cardiac Microthrombi in Fatal Covid-19 (Masonic Medical Research...) |
PRJDB11612 | Homo sapiens | Bulk RNA sequencing of FFPE sample from COVID-19 patient (Institute of Advanced Medicine,...) |
PRJNA756316 | Homo sapiens | Human Nasal Epithelial Cells sustain persistent SARS-CoV-2 infection in vitro, despite eliciting a prolonged antiviral response. (Wang Linfa Lab, Emerging...) |
PRJNA771040 | Homo sapiens | Transcriptomic profiles revealed down regulation of low-density lipoprotein particle receptor activity pathway in survived from severe COVID-19-19. (Laboratory of Molecular Genetics...) |
PRJNA797377 | Homo sapiens | Protective immune trajectories in early viral containment of non-pneumonic SARS-CoV-2 infection (LMU Munich) |
PRJNA797428 | Homo sapiens | Cap-independent translation and a precisely localized RNA sequence enable SARS-CoV-2 to control host translation and escape anti-viral response (Weizmann Institute of Science) |
PRJNA714051 | Homo sapiens | Cannabidiol Inhibits SARS-CoV-2 Replication through Induction of the Host ER Stress and Innate Immune Responses (University of Chicago) |
PRJNA798975 | Homo sapiens | Limited extent and consequences of pancreatic SARS-CoV-2 infection (Department of Microbiology,...) |
PRJNA762681 | Homo sapiens | Systems analysis of interaction between p38/MAPK pathway and SARS-CoV-2 (Johnson Lab, Microbiology,...) |
PRJNA629682 | Homo sapiens | Attenuation of SARS-CoV-2 Infection by Losartan in Human Kidney Organoids (Biernaskie Lab, Comparative...) |
PRJNA781246 | Homo sapiens | Prior BNT162b vaccination enhances interferon-JAK-STAT regulated antiviral programs in hospitalized COVID-19 patients infected with the SARS-CoV-2 Beta variant (Laboratory of Genetics and...) |
PRJNA797391 | Homo sapiens | SARS-CoV-2 Infection Induces Ferroptosis of Human Pluripotent Stem Cell-Derived Sinoatrial Nodal like Pacemaker Cells [single-cell RNA-seq] (Surgery, Weill Cornell Medical...) |
PRJNA791326 | Homo sapiens | Single cell transcriptomics of PBMCs during severe COVID-19 (Washington University In...) |
PRJNA750398 | Homo sapiens | Next Generation Sequencing of sorted central memory CD4 T cells (TCM) from young and elderly severe SARS-CoV-2 patients (University of Modena and...) |
PRJNA805095 | Homo sapiens | Global transcriptomic analyses of pluripotent stem cell-derived airway epithelial cells at 1 and 3 days after infection with SARS-CoV-2 (Center for Regenerative Medicine,...) |
PRJNA714880 | Homo sapiens | Transcriptomic analysis revealed increased expression of genes involved in keratinization in the tears of COVID-19 patients (IRCCS Centro Neurolesi "Bonino-Pulejo") |
PRJNA745975 | Homo sapiens | Transcriptome analysis of human colonic organoids infected SARS-CoV-2 (Cadwell Lab, Microbiology,...) |
PRJNA693201 | Homo sapiens | Identification of distinct immune cell subsets associated with various clinical presentations, disease severity and viral persistence of SARS-CoV-2 infection (precision medicine center,...) |
PRJNA719305 | Homo sapiens | Genome-wide Analyses Revealed the Global Impacts of SARS-CoV-2 Viral Gene Orf9c on Human Cardiomyocytes (Department of Pediatrics,...) |
PRJNA782306 | Homo sapiens | Transcriptomes of SARS-CoV-2 naïve and recovered individuals vaccinated with inactivated vaccine (Pathogenobiology, SDCDC) |
PRJNA752081 | Homo sapiens | Upregulation of cytokine signalling in platelet increases risk of thrombophilia in severe COVID-19 patients (Prasenjit Guchhait) |
PRJNA787951 | Homo sapiens | Immune transcriptome analysis of COVID-19 patients infected with SARS-CoV-2 variants carrying the E484K escape mutation identifies a distinct gene module (Laboratory of Genetics and...) |
PRJNA807370 | Homo sapiens | Whole blood transcriptome from Covid-19 patients in India (Biochemistry, IISC) |
PRJNA809356 | Homo sapiens | Transcriptomic clustering of critically-ill COVID-19 patients [Day 1-RNA-Seq] (Laboratorio de Investigación...) |
PRJNA809566 | Homo sapiens | Transcriptomic clustering of critically-ill COVID-19 patients [Day 1-miRNA-Seq] (Laboratorio de Investigación...) |
PRJNA796591 | Homo sapiens | Changes of small non-coding RNAs by severe acute respiratory syndrome coronavirus 2 infection (Pediatrics, University of...) |
PRJNA777558 | Homo sapiens | Deciphering COVID-19 host transcriptomic complexity and variations for therapeutic discovery against new variants (Bin Chen lab, Department...) |
PRJNA811519 | Homo sapiens | Exposure of PBMCs to SARS-CoV-2, as opposed to SARS-CoV, induces cell-intrinsic type I innate immunity responses in several immune cell types in the absence of productive infection (Goffinet, Institute of Virology,...) |
PRJNA797780 | Homo sapiens | Single-cell transcriptomic analysis of blood T cells from healthy controls, MS patients and COVID-19 patients by 10X genomics (Institute for Immunity, Transplantation...) |
PRJNA786238 | Homo sapiens | Next Generation Sequencing of SARS-CoV-2 infected lung epithelial cells derived from iPSC (Eyestem research) |
PRJNA788374 | Homo sapiens | mRNA vaccination in octogenarian nuns 15 and 20 months after recovery from COVID-19 elicits robust immune and antibody responses that include Omicron (Laboratory of Genetics and...) |
PRJNA743007 | Homo sapiens | SARS-CoV-2 Nsp14 mediates the effects of viral infection on the host cell transcriptome (Brandeis University) |
PRJNA804953 | Homo sapiens | Viral mimicry of Interleukin-17A by SARS-COV-2 ORF8 (Cancer Biology, Cleveland...) |
PRJNA780522 | Homo sapiens | Severe COVID-19 is associated with molecular signatures of aging in the human brain (BIDMC) |
PRJNA823920 | Homo sapiens | Next generation sequencing transcriptome analysis of patient-derived macrophages after SARS-CoV-2 mRNA vaccination (Schumacher, Bioinformatics...) |
PRJNA645700 | Homo sapiens | Long-term longitudinal analysis of peripheral blood transcriptome in COVID-19 patients (Beijing institute of Biotechnology) |
PRJNA833037 | Homo sapiens | Circulating microRNA signatures associated with disease severity and outcome in COVID-19 patients (Campus Biomedico, Medicine,...) |
PRJNA738502 | Homo sapiens | mRNA profiling in pooled human umbilical vein endothelial cells stimulated with Coronavirus Disease 2019 (COVID-19) patient plasma (University Health Network) |
PRJNA827153 | Homo sapiens | Biologic correlates of COVID-19 resolution using single cell RNA sequecing (Rutgers University) |
PRJNA748049 | Homo sapiens | Probiotic consortia improve anti-viral immunity to SARS-CoV-2 in Ferrets [RNA-seq] (GEM, International Flavors...) |
PRJNA737991 | Homo sapiens | Whole transcriptome miRNA profiling of Coronavirus Disease 2019 (COVID-19) patient plasma. (University Health Network) |
PRJNA821420 | Homo sapiens | An endogenously activated antiviral state restricts SARS-CoV-2 infection in differentiated primary airway epithelial cells (Centre for Experimental Medicine,...) |
PRJNA720694 | Homo sapiens | SARS-CoV-2 Viral Genes Compromise Survival and Functions of Human Cardiomyocytes via Reducing Cellular ATP Level (Department of Pediatrics,...) |
PRJNA751094 | Homo sapiens | Effect of SARS-CoV-2 on the human placenta (Surgery, Weill Cornell Medical...) |
PRJNA813159 | Homo sapiens | Impact of an Immune Modulator Mycobacterium-w on Adaptive Natural Killer Cells and Protection Against COVID-19 (Cellular Therapy and Immunology,...) |
PRJNA666884 | Homo sapiens | Early Predicting COVID-19 Severity Value with Extracellular Vesicles and Extracellular RNAs (Division of Respiratory Diseases,...) |
PRJNA755276 | Homo sapiens | Analysis of circulating miRNAs altered in the acute respiratory distress syndrome related to SARS-CoV-2 infection (MARData-BU, Hospital del...) |
PRJNA730906 | Homo sapiens | Implicating effector genes at COVID-19 GWAS loci using promoter-focused Capture-C in disease-relevant immune cell types [RNA-seq] (Struan Grant and Andrew Wells,...) |
PRJNA834649 | Homo sapiens | Inhibition of Toll-like receptor 4 and Interleukin-1 receptor prevent SARS-CoV-2 mediated kidney injury in vitro (Hokkaido University) |
PRJNA769955 | Homo sapiens | Heart-on-a-chip model of SARS-CoV-2 infection and treatment with induced pluripotent stem cell derived extracellular vesicles (Medical College of Wisconsin) |
PRJNA699486 | Homo sapiens | Identification of distinct miRNAs associated with SARS-CoV-2 infection (precision medicine center,...) |
PRJNA817264 | Homo sapiens | Discovery and functional interrogation of the virus and host RNA interactome of SARS-CoV-2 proteins [Ribo-Seq] (UCSD) |
PRJNA819422 | Homo sapiens | Single-cell transcriptomics reveal a unique memory-like NK cell subset that accumulates with aging and correlates with disease severity in COVID-19 (University of Science and...) |
PRJNA814290 | Homo sapiens | Functional reprogramming of monocytes in acute and convalescent severe COVID-19 patients [RNA-seq] (Université Libre de Bruxelles) |
PRJNA708208 | Homo sapiens | Transcriptional profiling of human KIR+ and KIR- CD8 T cells by bulk RNA-seq (Institute for Immunity, Transplantation...) |
PRJNA679897 | Homo sapiens | Interferon-regulated genetic programs and JAK/STAT pathway activate the intronic promoter of the short ACE2 isoform in renal proximal tubules [RNA-seq] (Laboratory of Genetics and...) |
PRJNA838497 | Homo sapiens | Single-Cell RNA Sequencing to Decipher the Immunogenicity of ChAdOx1 nCoV-19/AZD1222 and mRNA-1273 Vaccines in Patients with Autoimmune Rheumatic Diseases (TCVGH) |
PRJNA684327 | Homo sapiens | Single-cell RNA sequencing of Tocilizumab-treated peripheral blood mononuclear cells as an in vitro model of inflammation (Ye, Graduate Division, University...) |
PRJNA724033 | Homo sapiens | Nopp140-chaperoned 2’-O-methylation of small nuclear RNAs in Cajal bodies ensures splicing fidelity (Meier Lab, Department of...) |
PRJNA753532 | Homo sapiens | Short duplex RNAs induce potent immunostimulation via Hoogsteen G-G base pairing-mediated dimerization (Wyss Institute) |
PRJNA669838 | Homo sapiens | Human Tubular Epithelial Cells Activate a Coordinated Stress Response after Serum Exposure [RNAseq-pid2019] (University of Washington) |
PRJNA659992 | Homo sapiens | Human lung organoid for modeling infection and disease conditions (Lung I) (Boolean, Pediatrics, UCSD) |
PRJNA749873 | Homo sapiens | Transcriptome characterization of organoids derived from healthy and irreversibly damaged NASH patient liver (University of Pennsylvania) |
PRJNA731855 | Homo sapiens | Molecular profiling reveals human biomarker signatures in patients after allogeneic stem cell transplantation suffering from invasive aspergillosis (Systems Biology and Bioinformatics,...) |
PRJNA719377 | Homo sapiens | Effect of lactoferrin treatment on iAEC2 (University of Michigan) |
PRJNA728117 | Homo sapiens | Large-scale genomic study reveals robust activation of the immune system following advanced Inner Engineering meditation retreat (University of Florida) |
PRJNA679047 | Homo sapiens | JAK inhibitors dampen activation of interferon-stimulated transcription of ACE2 isoforms in human airway epithelial cells (RNA-seq) (Laboratory of Genetics and...) |
PRJNA763506 | Homo sapiens | The snoGloBe interaction predictor reveals a broad spectrum of C/D snoRNA RNA targets (Université de Sherbrooke) |
PRJNA762922 | Homo sapiens | Homo sapiens Transcriptome or Gene expression (Vanderbilt University Medical...) |
PRJNA648499 | Homo sapiens | Single-cell RNA sequencing of human nasal mucosa (Institute for Basic Science) |
PRJNA669691 | Homo sapiens | Human Tubular Epithelial Cells Activate a Coordinated Stress Response after Serum Exposure [RNAseq-pid1830] (University of Washington) |
PRJNA679844 | Homo sapiens | Single-cell RNA-seq of air-liquid interface bronchioalveolar cells (Single Cell Discoveries) |
PRJNA738854 | Homo sapiens | Downregulation of exhausted cytotoxic T cells in gene expression networks of multisystem inflammatory syndrome in children (Icahn Medical School at Mount...) |
PRJNA722510 | Homo sapiens | Stem cell-derived trophoblast organoids model human placental development and susceptibility to emerging pathogens (Washington University School...) |
PRJNA815866 | Homo sapiens | Immune transcriptome in adult-onset Still’s disease with mild flare following administration of mRNA vaccine BNT162b2 (Laboratory of Genetics and...) |
PRJNA841359 | Homo sapiens | An herbal medicine-based formula affected the epithelial cell line, BEAS-2B, genes expression. (Professor Chi-Ying Huang,...) |
PRJNA659990 | Homo sapiens | Human lung organoid for modeling infection and disease conditions (Lung II) (Boolean, Pediatrics, UCSD) |
PRJNA779249 | Homo sapiens | Homo sapiens Transcriptome or Gene expression (West China Hospital of Sichuan...) |
PRJNA647903 | Homo sapiens | Elucidation of remdesivir cytotoxicity pathways through genome-wide CRISPR/Cas9 screening and transcriptomics (Division of Genetics, Department...) |
PRJNA792569 | Homo sapiens | What goes around comes around: artificial circular RNAs bypass cellular antiviral responses (Biology and Chemistry (FB08),...) |
PRJNA656002 | Homo sapiens | Comparison of children and adults’ lung tissues by scRNA-seq (singleron) |
PRJNA700860 | Homo sapiens | Transcriptomic analysis of of SNX-5422-treated human primary tracheobronchial epithelial (TBE) cells. (Permar Lab, Duke Human Vaccine...) |
PRJNA719801 | Homo sapiens | Single-cell RNA sequencing of human nasal swab from healthy donors (Center for Vascular Research,...) |
PRJNA827806 | Homo sapiens | Genome-wide CRISPR Knockout Screen Identified PLAC8 as an Essential Factor for SADS-CoVs Infection (Baric, Epidemiology, UNC...) |
PRJNA750396 | Homo sapiens | Single-cell RNA-seq of human kidney organoids (Advanced Genomics, Hemato-Oncology,...) |
PRJNA648957 | Homo sapiens | Multi-omic data integration allows baseline immune signatures to predict hepatitis B vaccine response in a small cohort (Amy Lee, Molecular Biology...) |
PRJNA701642 | Homo sapiens | mRNA-seq of large airway basal cell, small airway basal cell and alveolar type2 cells from normal patients (Rajagopal, Center for Regenerative...) |
PRJNA731508 | Homo sapiens | Regulatory KIR+RA+ T cells accumulate with age and are highly activated during viral respiratory disease (RIVM) |
PRJNA625888 | Homo sapiens | Cell-intrinsic differences between human tracheal epithelial cells from children and adults [FACS-sorted basal cells] (Lungs for Living, UCL Respiratory,...) |
PRJNA704573 | Homo sapiens | RNA-seq Analysis of control and CyPA-stimulated BEAs-2B cells Transcriptomes (cell biology, Cell biology...) |
PRJNA832139 | Homo sapiens | Heterologous ChAdOx1-BNT162b2 vaccination in a Korean cohort induces a robust genetic immune and antibody response that includes Omicron [RNA_seq] (Laboratory of Genetics and...) |
PRJNA673821 | Homo sapiens | RNA-seq profiles on hESC-derived macrophage (The Chen lab, Pritzker School...) |
PRJNA625892 | Homo sapiens | Cell-intrinsic differences between human tracheal epithelial cells from children and adults [cultured basal cells] (Lungs for Living, UCL Respiratory,...) |
PRJNA691303 | Homo sapiens | The role of XIST in X-inactivation maintenance in B cells (RNA-seq) (Stanford University) |
PRJNA622298 | Homo sapiens | Single-cell RNA-seq of engineered healthy human kidney organoids (Advanced Genomics, Hemato-Oncology,...) |
PRJNA771707 | Homo sapiens | Validate whether the targeting of crRNAs affected the host cell gene expression (Stanley Qi lab, Bioengineering,...) |
PRJNA832138 | Homo sapiens | Heterologous ChAdOx1-BNT162b2 vaccination in a Korean cohort induces a robust genetic immune and antibody response that includes Omicron [scRNA-seq] (Laboratory of Genetics and...) |
PRJDB12786 | Homo sapiens | The effects of the SARS-CoV-2 ORF8 secretory glycoprotein on human primary monocyte-derived macrophages (MDMs) (Department of Infectious...) |
PRJNA656274 | Homo sapiens | Transcriptomic profiling of human corona virus (HCoV)-229E -infected human cells (Sheba Medical Center at Tel...) |
PRJNA761132 | Homo sapiens | Whole transcriptome sequencing from covid-19 and control lung biopsies (Biochemical engineering and...) |
PRJNA831830 | Homo sapiens | Antigenic determinants of SARS-CoV-2-specific CD4+ T cell lines reveals M protein-driven dysregulation of interferon signaling (NIAID, NIH) |
PRJNA790648 | Homo sapiens | Conjunctival epithelial cells resist productive SARS-CoV-2 infection (Newcastle University) |
PRJNA792807 | Homo sapiens | Resistin Forms a Network with Cytokines Associated with Endothelial Damage and Worse Outcome in COVID-19 (Human Immunology (Single...) |
PRJNA716611 | Homo sapiens | Immune responses to Coronavirus disease-19 with Thymosin α 1 intervention: an observational cohort study (precision medicine center,...) |
PRJNA832132 | Homo sapiens | Prior vaccination exceeds prior infection in eliciting innate and humoral immune responses in Omicron infected outpatients (Laboratory of Genetics and...) |
PRJNA783307 | Homo sapiens | A bipotential organoid culture of respiratory epithelium for modeling SARS-CoV-2 infection (Microbiology, The University...) |
PRJNA730810 | Homo sapiens | BNT162b2 vaccination enhances interferon-JAK-STAT-regulated antiviral programs in COVID-19 patients infected with the SARS-CoV-2 Beta variant (Laboratory of Genetics and...) |
PRJNA745333 | Homo sapiens | Gene expression analysis of whole blood obtained from COVID-19 in the Osaka cohort (Human Immunology (Single...) |
PRJNA754796 | Homo sapiens | Clinical significance of interferon signal based on mRNA-microRNA integration and plasma protein analyses in the critically ill patients with COVID19 (Human Immunology (Single...) |
PRJNA849921 | Homo sapiens | Differential chromatin accessibility in peripheral blood mononuclear cells underlies COVID-19 disease severity prior to seroconversion [bulkRNA-Seq] (Center for Applied Genomics...) |
PRJNA853574 | Homo sapiens | β-hydroxybutyrate restores T cell metabolism and function in severe COVID-19 (Univeristy of Bonn) |
PRJNA774978 | Homo sapiens | RNA-seq analysis of nasopharyngeal swabs from asymptomatic and mildly symptomatic COVID-19 patients (School of Life Sciences and...) |
PRJNA852187 | Homo sapiens | Antiviral function and viral antagonism of the rapidly evolving dynein activating adapter NINL (University of California...) |
PRJNA819163 | Homo sapiens | Monocytic-Myeloid Derived Suppressor Cells Suppress T-Cell Responses in Recovered SARS CoV2-Infected Individuals (Medicine, University of California,...) |
PRJNA802194 | Homo sapiens | Blood transcriptomes of SARS-CoV-2 infected kidney transplant recipients demonstrate immune insufficiency (Ichan School of Medicine...) |
PRJNA859179 | Homo sapiens | Early suppression of antiviral host response and protocadherins by SARS-CoV-2 Spike protein in monocyte-derived macrophages (Laboratory of Retroviral...) |
PRJNA718524 | Homo sapiens | SUMOylation restrains the degradation of ACE2 through TOLLIP-mediated selective autophagy to facilitate the host susceptibility to SARS-CoV-2 infection (sysu) |
PRJNA849954 | Homo sapiens | Differential chromatin accessibility in peripheral blood mononuclear cells underlies COVID-19 disease severity prior to seroconversion [scRNA-Seq] (Center for Applied Genomics...) |
PRJNA795179 | Homo sapiens | SARS-CoV-2 diverges from other betacoronaviruses in only partially activating the IRE1a/XBP1 ER stress pathway in human lung-derived cells (University of Chicago) |
PRJNA846717 | Homo sapiens | RNAseq analysis of SARS-CoV-2 infection of A549ACE cells with dARKSAP virus (Korb Lab, University of Pennsylvania) |
PRJNA797951 | Homo sapiens | ScRNA-seq Expression of APOC2 and IFI27 Identifies Four Alveolar Macrophage Superclusters in Cystic Fibrosis and Healthy BALF (Jakubzick, Microbiology and...) |
PRJNA666676 | MAIT cell activation augments adenovirus vector vaccine immunogenicity | MAIT cell activation augments adenovirus vector vaccine immunogenicity (Dan Barouch, Center for Virology...) |
PRJNA750088 | Macrophages govern antiviral responses in human lung tissues protected from SARS-CoV-2 infection | Macrophages govern antiviral responses in human lung tissues protected from SARS-CoV-2 infection (Connor lab, National Emerging...) |
PRJNA746455 | Macrophages govern antiviral responses in human lung tissues protected from SARS-CoV-2 infection | Macrophages govern antiviral responses in human lung tissues protected from SARS-CoV-2 infection (BU Single Cell Sequencing...) |
PRJNA680599 | Metabolic reprogramming and epigenetic changes of vital organs in SARS-CoV-2 induced systemic toxicity | Metabolic reprogramming and epigenetic changes of vital organs in SARS-CoV-2 induced systemic toxicity (Pellegrini Lab, Molecular...) |
PRJNA624302 | Modeling SARS-Cov-2 Infection in Human Airway Epithelium Organoids Transcriptome | Modeling SARS-Cov-2 Infection in Human Airway Epithelium Organoids Transcriptome (Southern University of Science...) |
PRJNA699591 | Pharmacological Activation of STING blocks SARS-CoV-2 infection | Pharmacological Activation of STING blocks SARS-CoV-2 infection (Pathology and Laboratory...) |
PRJNA716338 | RNA-Seq Quantitative Analysis of the regulation of SARS-CoV-2 infection on autophagy and apoptosis related gene transcriptome in infected cells | RNA-Seq Quantitative Analysis of the regulation of SARS-CoV-2 infection on autophagy and apoptosis related gene transcriptome in infected cells (School of Life Science, Sun...) |
PRJNA797392 | SARS-CoV-2 Infection Induces Ferroptosis of Human Pluripotent Stem Cell-Derived Sinoatrial Nodal like Pacemaker Cells [bulk RNA-seq] | SARS-CoV-2 Infection Induces Ferroptosis of Human Pluripotent Stem Cell-Derived Sinoatrial Nodal like Pacemaker Cells [bulk RNA-seq] (Surgery, Weill Cornell Medical...) |
PRJNA759880 | SARS-CoV-2 expresses a microRNA-like small RNA able to selectively repress host genes | SARS-CoV-2 expresses a microRNA-like small RNA able to selectively repress host genes (Joan A. Steitz, MBB, Yale...) |
PRJNA741531 | SARS-CoV-2 infected and uninfected VeroE6 and A549-ACE2: Bemcentinib and liposome treatments | SARS-CoV-2 infected and uninfected VeroE6 and A549-ACE2: Bemcentinib and liposome treatments (Maury Lab, Microbiology and...) |
PRJNA667921 | SARS-CoV-2 infected cells present HLA-I peptides from canonical and out-of-frame ORFs | SARS-CoV-2 infected cells present HLA-I peptides from canonical and out-of-frame ORFs (Eran Segal, Weizmann Institute...) |
PRJNA649246 | SARS-CoV-2 infection is effectively treated and prevented by EIDD-2801 | SARS-CoV-2 infection is effectively treated and prevented by EIDD-2801 (BARC, UNC SOM) |
PRJNA731890 | SARS-CoV-2 infects and replicates in photoreceptor and retinal ganglion cells of human retinal organoids | SARS-CoV-2 infects and replicates in photoreceptor and retinal ganglion cells of human retinal organoids (Cell and Developmental Biology,...) |
PRJNA810734 | SARS-CoV-2 produces a diverse small viral RNA landscape capable of targeting host transcripts | SARS-CoV-2 produces a diverse small viral RNA landscape capable of targeting host transcripts (Sanford Lab, Molecular, Cell...) |
PRJNA615032 | Transcriptional response to SARS-CoV-2 infection | Transcriptional response to SARS-CoV-2 infection (tenOever Lab, Microbiology,...) |
PRJNA819093 | Transcriptome Analaysis of humanized lungs in COVID-19 [scRNAseq] | Transcriptome Analaysis of humanized lungs in COVID-19 [scRNAseq] (BBS Program, Yale University) |
PRJNA639791 | Transcriptomic analysis of human alveolar type II cell organoids post infection of SARS-CoV-2 | Transcriptomic analysis of human alveolar type II cell organoids post infection of SARS-CoV-2 (Tata Lab, Cell Biology, Duke...) |
PRJNA673197 | bulk RNAseq of SARS-COV2 infected human lung organoid | bulk RNAseq of SARS-COV2 infected human lung organoid (Stripp Lab, Lung and Regenerative...) |