marine sediment metagenome (ID 663545) - BioProject

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Accession: PRJNA663545 ID: 663545

marine sediment metagenome

Methane and iron cycling in Bothnian Sea coastal sediments

We inoculated a bioreactor with oxygen-depleted, methane- and iron-rich sediments from the Bothnian Sea in order to investigate microorganisms involved in methane and iron cycling. More...

Accession	PRJNA663545
Data Type	Genome sequencing and assembly
Scope	Environment
Organism	marine sediment metagenome[Taxonomy ID: 412755] unclassified sequences; metagenomes; ecological metagenomes; marine sediment metagenome
Submission	Registration date: 7-Oct-2020 Radboud University Nijmegen
Relevance	Environmental

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	57
SRA Experiments	4
Other datasets
BioSample	61
Assembly	57

Assembly details:

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Assembly level

Number of Assemblies

Contig

Total

57
57

Assembly	WGS	BioSample	Isolate	Taxonomy
GCA_014860925.1	JACZIU000000000	SAMN16147999	MAG1	Acholeplasmataceae bacterium
GCA_014860865.1	JACZIV000000000	SAMN16148000	MAG2	Afipia sp.
GCA_014860845.1	JACZIY000000000	SAMN16148003	MAG5	Anaerolineaceae bacterium
GCA_014860825.1	JACZIZ000000000	SAMN16148004	MAG6	Anaerolineaceae bacterium
GCA_014860775.1	JACZJA000000000	SAMN16148005	MAG7	Anaerolineae bacterium
GCA_014860745.1	JACZJC000000000	SAMN16148007	MAG9	Anaerolineales bacterium
GCA_014860805.1	JACZJB000000000	SAMN16148006	MAG8	Anaerolineales bacterium
GCA_014860725.1	JACZJD000000000	SAMN16148008	MAG10	Aquamicrobium sp.
GCA_014860345.1	JACZJW000000000	SAMN16148027	MAG29	Bacillota bacterium
GCA_014860695.1	JACZJG000000000	SAMN16148011	MAG13	Bacteroidales bacterium
GCA_014860685.1	JACZJF000000000	SAMN16148010	MAG12	Bacteroidales bacterium
GCA_014860665.1	JACZJI000000000	SAMN16148013	MAG15	Bacteroidales bacterium
GCA_014860635.1	JACZJH000000000	SAMN16148012	MAG14	Bacteroidales bacterium
GCA_014860625.1	JACZJJ000000000	SAMN16148014	MAG16	Bacteroidales bacterium
GCA_014860575.1	JACZJK000000000	SAMN16148015	MAG17	Bacteroidales bacterium
GCA_014860585.1	JACZJL000000000	SAMN16148016	MAG18	Bacteroidales bacterium
GCA_014860765.1	JACZJE000000000	SAMN16148009	MAG11	Bacteroidales bacterium
GCA_014860545.1	JACZJM000000000	SAMN16148017	MAG19	Bacteroidales bacterium
GCA_014860565.1	JACZJN000000000	SAMN16148018	MAG20	Bacteroidota bacterium
GCA_014860045.1	JACZKO000000000	SAMN16148045	MAG47	Brucella anthropi
GCA_014860455.1	JACZJQ000000000	SAMN16148021	MAG23	Bryobacteraceae bacterium
GCA_014860525.1	JACZJR000000000	SAMN16148022	MAG24	Burkholderia vietnamiensis
GCA_014860415.1	JACZJS000000000	SAMN16148023	MAG25	Burkholderiaceae bacterium
GCA_014860395.1	JACZJU000000000	SAMN16148025	MAG27	Burkholderiales bacterium
GCA_014860445.1	JACZJT000000000	SAMN16148024	MAG26	Burkholderiales bacterium
GCA_014860355.1	JACZJV000000000	SAMN16148026	MAG28	Burkholderiales bacterium
GCA_014860895.1	JACZIX000000000	SAMN16148002	MAG4	Candidatus Aminicenantes bacterium
GCA_014860885.1	JACZIW000000000	SAMN16148001	MAG3	Candidatus Aminicenantes bacterium
GCA_014860485.1	JACZJO000000000	SAMN16148019	MAG21	Candidatus Bathyarchaeota archaeon
GCA_014860495.1	JACZJP000000000	SAMN16148020	MAG22	Candidatus Bipolaricaulota bacterium
GCA_014860145.1	JACZKH000000000	SAMN16148038	MAG40	Candidatus Dojkabacteria bacterium
GCA_014859985.1	JACZKN000000000	SAMN16148044	MAG46	Candidatus Krumholzibacteriia bacterium
GCA_014859815.1	JACZKX000000000	SAMN16148054	MAG56	Candidatus Thorarchaeota archaeon
GCA_014860315.1	JACZJY000000000	SAMN16148029	MAG31	Dehalococcoidia bacterium
GCA_014860295.1	JACZKA000000000	SAMN16148031	MAG33	Deltaproteobacteria bacterium
GCA_014860285.1	JACZKB000000000	SAMN16148032	MAG34	Deltaproteobacteria bacterium
GCA_014860255.1	JACZJZ000000000	SAMN16148030	MAG32	Deltaproteobacteria bacterium
GCA_014860205.1	JACZKC000000000	SAMN16148033	MAG35	Deltaproteobacteria bacterium
GCA_014860245.1	JACZKD000000000	SAMN16148034	MAG36	Desulfofustis sp.
GCA_014860175.1	JACZKF000000000	SAMN16148036	MAG38	Desulfuromonadales bacterium
GCA_014860225.1	JACZKE000000000	SAMN16148035	MAG37	Desulfuromonadales bacterium
GCA_014860165.1	JACZKG000000000	SAMN16148037	MAG39	Devosia sp.
GCA_014860095.1	JACZKI000000000	SAMN16148039	MAG41	Gemmatimonadales bacterium
GCA_014860085.1	JACZKJ000000000	SAMN16148040	MAG42	Hydrogenophaga sp.
GCA_014860115.1	JACZKK000000000	SAMN16148041	MAG43	Ignavibacteriaceae bacterium
GCA_014860065.1	JACZKL000000000	SAMN16148042	MAG44	Ignavibacterium sp.
GCA_014859975.1	JACZKM000000000	SAMN16148043	MAG45	Ignavibacterium sp.
GCA_014859945.1	JACZKR000000000	SAMN16148048	MAG50	Paracoccaceae bacterium
GCA_014859965.1	JACZKQ000000000	SAMN16148047	MAG49	Phycisphaerae bacterium
GCA_014859885.1	JACZKU000000000	SAMN16148051	MAG53	Pseudomonadota bacterium
GCA_014860385.1	JACZJX000000000	SAMN16148028	MAG30	Pseudomonadota bacterium
GCA_014859895.1	JACZKS000000000	SAMN16148049	MAG51	Rhodospirillales bacterium
GCA_014859905.1	JACZKT000000000	SAMN16148050	MAG52	Rubrivivax sp.
GCA_014859865.1	JACZKV000000000	SAMN16148052	MAG54	Thermoleophilia bacterium
GCA_014859835.1	JACZKW000000000	SAMN16148053	MAG55	Thermoplasmata archaeon
GCA_014860005.1	JACZKP000000000	SAMN16148046	MAG48	Verrucomicrobiota bacterium
GCA_014874525.1	JACZKY000000000	SAMN16148055	-	marine sediment metagenome

SRA Data Details

Parameter	Value
Data volume, Gbases	14
Data volume, Mbytes	9099

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marine sediment metagenome

Methane and iron cycling in Bothnian Sea coastal sediments

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