Warning: The NCBI web site requires JavaScript to function. more...

BioProject

Organizing biological data

Result Filters

Display Settings:

Format

Summary
BioProject ID list
Accessions List

Send to:

Choose Destination

File
Clipboard
Collections
My Bibliography

Accession: PRJNA656387 ID: 656387

Streptococcus

Whole genome sequencing of Streptococcus isolates from study of rheumatoid arthritis patients and first-degree relatives

Study examined oral microbiome of RA patients, first-degree relatives and healthy controls. More...

Accession	PRJNA656387
Data Type	Genome sequencing and assembly
Scope	Multispecies
Publications	Moentadj R et al., "Streptococcus species enriched in the oral cavity of patients with RA are a source of peptidoglycan-polysaccharide polymers that can induce arthritis in mice.", Ann Rheum Dis, 2021 May;80(5):573-581
Submission	Registration date: 11-Aug-2020 University of Queensland
Relevance	Medical

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (WGS master)	15
SRA Experiments	199
Publications
PubMed	1
Other datasets
BioSample	214
Assembly	15

Assembly details:

Assembly level

Number of Assemblies

Scaffold

15
15

Assembly	Level	WGS	BioSample	Strain	Taxonomy
GCA_016648855.1		JACLQU000000000	SAMN15793724	6.1	Streptococcus parasanguinis
GCA_016648825.1		JACLQT000000000	SAMN15793725	7.1	Streptococcus parasanguinis
GCA_016648925.1		JACLQX000000000	SAMN15793721	1.1	Streptococcus parasanguinis
GCA_016648735.1		JACLQP000000000	SAMN15793729	12.1	Streptococcus parasanguinis
GCA_016648745.1		JACLQQ000000000	SAMN15793728	11.1	Streptococcus salivarius
GCA_016648765.1		JACLQR000000000	SAMN15793727	10.1	Streptococcus sp. 10.1
GCA_016648795.1		JACLQO000000000	SAMN15793730	15.1	Streptococcus sp. 15.1
GCA_016648675.1		JACLQN000000000	SAMN15793731	16.1	Streptococcus sp. 16.1
GCA_016648655.1		JACLQM000000000	SAMN15793732	17.1	Streptococcus sp. 17.1
GCA_016648865.1		JACLQW000000000	SAMN15793722	2.1	Streptococcus sp. 2.1
GCA_016648635.1		JACLQL000000000	SAMN15793733	21.1	Streptococcus sp. 21.1
GCA_016648645.1		JACLQK000000000	SAMN15793734	22.1	Streptococcus sp. 22.1
GCA_016648665.1		JACLQJ000000000	SAMN15793735	23.2	Streptococcus sp. 23.2
GCA_016648915.1		JACLQV000000000	SAMN15793723	3.1	Streptococcus sp. 3.1
GCA_016648815.1		JACLQS000000000	SAMN15793726	9.1	Streptococcus sp. 9.1

SRA Data Details

Parameter	Value
Data volume, Gbases	5
Data volume, Mbytes	2929

Supplemental Content

Related information

Assembly
All related Assemblies
BioSample
All related BioSamples
Genome
Related Genomes
Nucleotide
Related Nucleotide entry
PubMed
PubMed Links
SRA
All related SRA Experiments
WGS master
Link to WGS master record(s)

Recent activity

Clear Turn Off Turn On

Streptococcus
Streptococcus
Whole genome sequencing of Streptococcus isolates from study of rheumatoid arthritis patients and first-degree relatives

BioProject
choline transporter-like protein 4 [Mus musculus]
choline transporter-like protein 4 [Mus musculus]
gi|12963733|ref|NP_076046.1|

Protein

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...

You are here: NCBI