marine metagenome (ID 649215) - BioProject

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Accession: PRJNA649215 ID: 649215

marine metagenome

Metagenomic sequencing of the Black Sea water column

The samples reported here are from 15 depths (50 - 2000m) across the water column of the Black Sea western gyre. More...

Accession	PRJNA649215
Data Type	Genome sequencing and assembly
Scope	Environment
Organism	marine metagenome[Taxonomy ID: 408172] unclassified sequences; metagenomes; ecological metagenomes; marine metagenome
Publications	Villanueva L et al., "Bridging the membrane lipid divide: bacteria of the FCB group superphylum have the potential to synthesize archaeal ether lipids.", ISME J, 2021 Jan;15(1):168-182
Submission	Registration date: 1-Sep-2020 Utrecht University
Relevance	Environmental

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	265
WGS master	180
Genomic DNA	85
SRA Experiments	15
Protein Sequences	797
Publications
PubMed	1
PMC	1
Other datasets
BioSample	197
Assembly	180

Assembly details:

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Assembly level

Number of Assemblies

Scaffold

Contig

Total

158
22
180

Assembly	WGS	BioSample	Isolate	Taxonomy
GCA_014384285.1	JACNGE000000000	SAMN15784192	NIOZ-UU119	Actinomycetota bacterium
GCA_014384205.1	JACNGI000000000	SAMN15784196	NIOZ-UU122	Actinomycetota bacterium
GCA_014383045.1	JACNIO000000000	SAMN15784254	NIOZ-UU177	Actinomycetota bacterium
GCA_014382865.1	JACNIX000000000	SAMN15784263	NIOZ-UU21	Actinomycetota bacterium
GCA_014381945.1	JACNKQ000000000	SAMN15784309	NIOZ-UU63	Actinomycetota bacterium
GCA_014381745.1	JACNLA000000000	SAMN15784319	NIOZ-UU72	Actinomycetota bacterium
GCA_014381225.1	JACNLZ000000000	SAMN15784344	NIOZ-UU95	Alphaproteobacteria bacterium
GCA_014382515.1	JACNJO000000000	SAMN15784280	NIOZ-UU37	Alphaproteobacteria bacterium
GCA_014382345.1	JACNJX000000000	SAMN15784289	NIOZ-UU45	Alphaproteobacteria bacterium
GCA_014382605.1	JACNJM000000000	SAMN15784278	NIOZ-UU35	Anaerolineae bacterium
GCA_014381335.1	JACNLV000000000	SAMN15784340	NIOZ-UU91	Anaerolineales bacterium
GCA_014382145.1	JACNKE000000000	SAMN15784297	NIOZ-UU52	Anaerolineales bacterium
GCA_014382415.1	JACNJT000000000	SAMN15784285	NIOZ-UU41	Ardenticatenia bacterium
GCA_014381265.1	JACNMD000000000	SAMN15784348	NIOZ-UU99	Bacteroidota bacterium
GCA_014381215.1	JACNMC000000000	SAMN15784347	NIOZ-UU98	Bacteroidota bacterium
GCA_014381955.1	JACNKS000000000	SAMN15784311	NIOZ-UU65	Bacteroidota bacterium
GCA_014382125.1	JACNKI000000000	SAMN15784301	NIOZ-UU56	Bacteroidota bacterium
GCA_014382445.1	JACNJS000000000	SAMN15784284	NIOZ-UU40	Bacteroidota bacterium
GCA_014383005.1	JACNIP000000000	SAMN15784255	NIOZ-UU178	Bacteroidota bacterium
GCA_014383395.1	JACNHW000000000	SAMN15784236	NIOZ-UU160	Bacteroidota bacterium
GCA_014384105.1	JACNGN000000000	SAMN15784201	NIOZ-UU127	Bacteroidota bacterium
GCA_014383915.1	JACNGW000000000	SAMN15784210	NIOZ-UU135	Bacteroidota bacterium
GCA_014384245.1	JACNGF000000000	SAMN15784193	NIOZ-UU12	Bacteroidota bacterium
GCA_014466055.1	JACNMA000000000	SAMN15784345	NIOZ-UU96	Bathycoccus sp. NIOZ-UU96
GCA_014382045.1	JACNKL000000000	SAMN15784304	NIOZ-UU59	Candidatus Aminicenantes bacterium
GCA_014384365.1	JACNFZ000000000	SAMN15784187	NIOZ-UU114	Candidatus Atribacteria bacterium
GCA_014384355.1	JACNGA000000000	SAMN15784188	NIOZ-UU115	Candidatus Bathyarchaeota archaeon
GCA_014383635.1	JACNHK000000000	SAMN15784224	NIOZ-UU148	Candidatus Bathyarchaeota archaeon
GCA_014381835.1	JACNKW000000000	SAMN15784315	NIOZ-UU69	Candidatus Bathyarchaeota archaeon
GCA_014384865.1	JACNFJ000000000	SAMN15784171	NIOZ-UU10	Candidatus Brocadiales bacterium
GCA_014384665.1	JACNFI000000000	SAMN15784170	NIOZ-UU1	Candidatus Cloacimonadota bacterium
GCA_014382915.1	JACNIV000000000	SAMN15784261	NIOZ-UU2	Candidatus Cloacimonadota bacterium
GCA_014382495.1	JACNJR000000000	SAMN15784283	NIOZ-UU4	Candidatus Cloacimonadota bacterium
GCA_014382685.1	JACNJG000000000	SAMN15784272	NIOZ-UU3	Candidatus Cloacimonadota bacterium
GCA_014381995.1	JACNKO000000000	SAMN15784307	NIOZ-UU61	Candidatus Cloacimonadota bacterium
GCA_014382715.1	JACNJD000000000	SAMN15784269	NIOZ-UU27	Candidatus Desulfacyla euxinica
GCA_014381545.1	JACNLL000000000	SAMN15784330	NIOZ-UU82	Candidatus Desulfaltia bathyphila
GCA_014382665.1	JACNJH000000000	SAMN15784273	NIOZ-UU30	Candidatus Desulfatibia profunda
GCA_014383215.1	JACNIG000000000	SAMN15784246	NIOZ-UU17	Candidatus Desulfatibia vada
GCA_014381505.1	JACNLK000000000	SAMN15784329	NIOZ-UU81	Candidatus Desulfatifera sulfidica
GCA_014383445.1	JACNHV000000000	SAMN15784235	NIOZ-UU16	Candidatus Desulfobacula maris
GCA_014382295.1	JACNJZ000000000	SAMN15784291	NIOZ-UU47	Candidatus Desulfobia pelagia
GCA_014382535.1	JACNJN000000000	SAMN15784279	NIOZ-UU36	Candidatus Desulfolinea nitratireducens
GCA_014383285.1	JACNID000000000	SAMN15784243	NIOZ-UU167	Candidatus Endolissoclinum sp.
GCA_014381415.1	JACNLQ000000000	SAMN15784335	NIOZ-UU87	Candidatus Neomarinimicrobiota bacterium
GCA_014381485.1	JACNLN000000000	SAMN15784332	NIOZ-UU84	Candidatus Neomarinimicrobiota bacterium
GCA_014381725.1	JACNLC000000000	SAMN15784321	NIOZ-UU74	Candidatus Neomarinimicrobiota bacterium
GCA_014381685.1	JACNLD000000000	SAMN15784322	NIOZ-UU75	Candidatus Neomarinimicrobiota bacterium
GCA_014381755.1	JACNLB000000000	SAMN15784320	NIOZ-UU73	Candidatus Neomarinimicrobiota bacterium
GCA_014382015.1	JACNKN000000000	SAMN15784306	NIOZ-UU60	Candidatus Neomarinimicrobiota bacterium
GCA_014381925.1	JACNKR000000000	SAMN15784310	NIOZ-UU64	Candidatus Neomarinimicrobiota bacterium
GCA_014381855.1	JACNKV000000000	SAMN15784314	NIOZ-UU68	Candidatus Neomarinimicrobiota bacterium
GCA_014382815.1	JACNIY000000000	SAMN15784264	NIOZ-UU22	Candidatus Neomarinimicrobiota bacterium
GCA_014382965.1	JACNIS000000000	SAMN15784258	NIOZ-UU180	Candidatus Neomarinimicrobiota bacterium
GCA_014384325.1	JACNGC000000000	SAMN15784190	NIOZ-UU117	Candidatus Neomarinimicrobiota bacterium
GCA_014383995.1	JACNGS000000000	SAMN15784206	NIOZ-UU131	Candidatus Neomarinimicrobiota bacterium
GCA_014381285.1	JACNLU000000000	SAMN15784339	NIOZ-UU90	Candidatus Nitrosopelagicus sp.
GCA_014384055.1	JACNGO000000000	SAMN15784202	NIOZ-UU128	Candidatus Omnitrophota bacterium
GCA_014383345.1	JACNHY000000000	SAMN15784238	NIOZ-UU162	Candidatus Omnitrophota bacterium
GCA_014383265.1	JACNIC000000000	SAMN15784242	NIOZ-UU166	Candidatus Pelagibacter sp.
GCA_014383795.1	JACNHC000000000	SAMN15784216	NIOZ-UU140	Candidatus Pelagibacter sp.
GCA_014384565.1	JACNFO000000000	SAMN15784176	NIOZ-UU104	Candidatus Pseudothioglobus aerophilus
GCA_014381585.1	JACNLH000000000	SAMN15784326	NIOZ-UU79	Candidatus Sulfurimonas ponti
GCA_014384345.1	JACNGB000000000	SAMN15784189	NIOZ-UU116	Candidatus Thioglobus pontius
GCA_014384675.1	JACNFK000000000	SAMN15784172	NIOZ-UU100	Candidatus Thiopontia autotrophica
GCA_014383515.1	JACNHR000000000	SAMN15784231	NIOZ-UU154	Candidatus Woesearchaeota archaeon
GCA_014384625.1	JACNFN000000000	SAMN15784175	NIOZ-UU103	Chlorobium phaeobacteroides
GCA_014384295.1	JACNGD000000000	SAMN15784191	NIOZ-UU118	Chloroflexota bacterium
GCA_014384465.1	JACNFU000000000	SAMN15784182	NIOZ-UU11	Chloroflexota bacterium
GCA_014384425.1	JACNFX000000000	SAMN15784185	NIOZ-UU112	Chloroflexota bacterium
GCA_014383785.1	JACNHD000000000	SAMN15784217	NIOZ-UU141	Chloroflexota bacterium
GCA_014383685.1	JACNHI000000000	SAMN15784222	NIOZ-UU146	Chloroflexota bacterium
GCA_014383625.1	JACNHL000000000	SAMN15784225	NIOZ-UU149	Chloroflexota bacterium
GCA_014383605.1	JACNHM000000000	SAMN15784226	NIOZ-UU15	Chloroflexota bacterium
GCA_014383105.1	JACNIL000000000	SAMN15784251	NIOZ-UU174	Chloroflexota bacterium
GCA_014382185.1	JACNKF000000000	SAMN15784298	NIOZ-UU53	Chloroflexota bacterium
GCA_014382305.1	JACNJY000000000	SAMN15784290	NIOZ-UU46	Chloroflexota bacterium
GCA_014384505.1	JACNFT000000000	SAMN15784181	NIOZ-UU109	Cryomorphaceae bacterium
GCA_014383935.1	JACNGU000000000	SAMN15784208	NIOZ-UU133	Cryomorphaceae bacterium
GCA_014384375.1	JACNFY000000000	SAMN15784186	NIOZ-UU113	DPANN group archaeon
GCA_014384515.1	JACNFS000000000	SAMN15784180	NIOZ-UU108	Dehalococcoidia bacterium
GCA_014384155.1	JACNGJ000000000	SAMN15784197	NIOZ-UU123	Dehalococcoidia bacterium
GCA_014383355.1	JACNHX000000000	SAMN15784237	NIOZ-UU161	Dehalococcoidia bacterium
GCA_014383505.1	JACNHP000000000	SAMN15784229	NIOZ-UU152	Deltaproteobacteria bacterium
GCA_014383115.1	JACNIK000000000	SAMN15784250	NIOZ-UU173	Deltaproteobacteria bacterium
GCA_014382765.1	JACNJB000000000	SAMN15784267	NIOZ-UU25	Deltaproteobacteria bacterium
GCA_014384065.1	JACNGP000000000	SAMN15784203	NIOZ-UU129	Deltaproteobacteria bacterium
GCA_014383965.1	JACNGV000000000	SAMN15784209	NIOZ-UU134	Deltaproteobacteria bacterium
GCA_014383825.1	JACNHB000000000	SAMN15784215	NIOZ-UU14	Deltaproteobacteria bacterium
GCA_014383735.1	JACNHF000000000	SAMN15784219	NIOZ-UU143	Deltaproteobacteria bacterium
GCA_014381495.1	JACNLM000000000	SAMN15784331	NIOZ-UU83	Deltaproteobacteria bacterium
GCA_014382905.1	JACNIU000000000	SAMN15784260	NIOZ-UU19	Desulfobacterales bacterium
GCA_014383555.1	JACNHQ000000000	SAMN15784230	NIOZ-UU153	Euryarchaeota archaeon
GCA_014384685.1	JACNFL000000000	SAMN15784173	NIOZ-UU101	Euryarchaeota archaeon
GCA_014384265.1	JACNGG000000000	SAMN15784194	NIOZ-UU120	FCB group bacterium
GCA_014382775.1	JACNJC000000000	SAMN15784268	NIOZ-UU26	FCB group bacterium
GCA_014382565.1	JACNJK000000000	SAMN15784276	NIOZ-UU33	FCB group bacterium
GCA_014383205.1	JACNIE000000000	SAMN15784244	NIOZ-UU168	FCB group bacterium
GCA_014382225.1	JACNKD000000000	SAMN15784296	NIOZ-UU51	FCB group bacterium
GCA_014381405.1	JACNLS000000000	SAMN15784337	NIOZ-UU89	FCB group bacterium
GCA_014381465.1	JACNLP000000000	SAMN15784334	NIOZ-UU86	Flavobacteriales bacterium
GCA_014383835.1	JACNHA000000000	SAMN15784214	NIOZ-UU139	Flavobacteriales bacterium
GCA_014382825.1	JACNJA000000000	SAMN15784266	NIOZ-UU24	Flavobacteriales bacterium
GCA_014382925.1	JACNIT000000000	SAMN15784259	NIOZ-UU181	Gammaproteobacteria bacterium
GCA_014382695.1	JACNJF000000000	SAMN15784271	NIOZ-UU29	Gammaproteobacteria bacterium
GCA_014384125.1	JACNGM000000000	SAMN15784200	NIOZ-UU126	Gammaproteobacteria bacterium
GCA_014381665.1	JACNLF000000000	SAMN15784324	NIOZ-UU77	Gammaproteobacteria bacterium
GCA_014382195.1	JACNKG000000000	SAMN15784299	NIOZ-UU54	Gammaproteobacteria bacterium
GCA_014381785.1	JACNKZ000000000	SAMN15784318	NIOZ-UU71	Kiritimatiellota bacterium
GCA_014382585.1	JACNJL000000000	SAMN15784277	NIOZ-UU34	Limisphaerales bacterium
GCA_014384645.1	JACNFM000000000	SAMN15784174	NIOZ-UU102	Methanomicrobia archaeon
GCA_014384555.1	JACNFR000000000	SAMN15784179	NIOZ-UU107	Nitrosopumilus sp.
GCA_014384445.1	JACNFV000000000	SAMN15784183	NIOZ-UU110	Nitrosopumilus sp.
GCA_014384145.1	JACNGK000000000	SAMN15784198	NIOZ-UU124	Nitrososphaerota archaeon
GCA_014382485.1	JACNJQ000000000	SAMN15784282	NIOZ-UU39	Nitrospinota bacterium
GCA_014382285.1	JACNKA000000000	SAMN15784292	NIOZ-UU48	Nitrospinota bacterium
GCA_014383905.1	JACNGY000000000	SAMN15784212	NIOZ-UU137	PVC group bacterium
GCA_014383585.1	JACNHN000000000	SAMN15784227	NIOZ-UU150	PVC group bacterium
GCA_014384575.1	JACNFP000000000	SAMN15784177	NIOZ-UU105	PVC group bacterium
GCA_014382875.1	JACNIW000000000	SAMN15784262	NIOZ-UU20	Paracoccaceae bacterium
GCA_014383885.1	JACNGX000000000	SAMN15784211	NIOZ-UU136	Parcubacteria group bacterium
GCA_014383075.1	JACNIN000000000	SAMN15784253	NIOZ-UU176	Pelagibacteraceae bacterium
GCA_014383385.1	JACNIA000000000	SAMN15784240	NIOZ-UU164	Pelagibacteraceae bacterium
GCA_014382065.1	JACNKM000000000	SAMN15784305	NIOZ-UU6	Pelagibacterales bacterium
GCA_014382255.1	JACNKB000000000	SAMN15784293	NIOZ-UU49	Planctomycetia bacterium
GCA_014382385.1	JACNJV000000000	SAMN15784287	NIOZ-UU43	Planctomycetota bacterium
GCA_014382465.1	JACNJP000000000	SAMN15784281	NIOZ-UU38	Planctomycetota bacterium
GCA_014382595.1	JACNJJ000000000	SAMN15784275	NIOZ-UU32	Planctomycetota bacterium
GCA_014383455.1	JACNHU000000000	SAMN15784234	NIOZ-UU158	Planctomycetota bacterium
GCA_014382805.1	JACNIZ000000000	SAMN15784265	NIOZ-UU23	Planctomycetota bacterium
GCA_014384025.1	JACNGQ000000000	SAMN15784204	NIOZ-UU13	Planctomycetota bacterium
GCA_014383725.1	JACNHG000000000	SAMN15784220	NIOZ-UU144	Planctomycetota bacterium
GCA_014384225.1	JACNGH000000000	SAMN15784195	NIOZ-UU121	Planctomycetota bacterium
GCA_014381385.1	JACNLR000000000	SAMN15784336	NIOZ-UU88	Planctomycetota bacterium
GCA_014381555.1	JACNLO000000000	SAMN15784333	NIOZ-UU85	Planctomycetota bacterium
GCA_014381305.1	JACNLW000000000	SAMN15784341	NIOZ-UU92	Planctomycetota bacterium
GCA_014381695.1	JACNLE000000000	SAMN15784323	NIOZ-UU76	Planctomycetota bacterium
GCA_014382075.1	JACNKK000000000	SAMN15784303	NIOZ-UU58	Planctomycetota bacterium
GCA_014381885.1	JACNKT000000000	SAMN15784312	NIOZ-UU66	Planctomycetota bacterium
GCA_014381825.1	JACNKX000000000	SAMN15784316	NIOZ-UU7	Planctomycetota bacterium
GCA_014451015.1	JACRUV000000000	SAMN15784294	NIOZ-UU5	Planctomycetota bacterium
GCA_014381895.1	JACNKU000000000	SAMN15784313	NIOZ-UU67	Pseudomonadota bacterium
GCA_014381795.1	JACNKY000000000	SAMN15784317	NIOZ-UU70	Pseudomonadota bacterium
GCA_014381625.1	JACNLJ000000000	SAMN15784328	NIOZ-UU80	Pseudomonadota bacterium
GCA_014383535.1	JACNHO000000000	SAMN15784228	NIOZ-UU151	Pseudomonadota bacterium
GCA_014383485.1	JACNHS000000000	SAMN15784232	NIOZ-UU155	Pseudomonadota bacterium
GCA_014383185.1	JACNIH000000000	SAMN15784247	NIOZ-UU170	Pseudomonadota bacterium
GCA_014382245.1	JACNKC000000000	SAMN15784295	NIOZ-UU50	Pseudomonadota bacterium
GCA_014381645.1	JACNLG000000000	SAMN15784325	NIOZ-UU78	Puniceicoccaceae bacterium
GCA_014382375.1	JACNJU000000000	SAMN15784286	NIOZ-UU42	Rhodospirillaceae bacterium
GCA_014383645.1	JACNHJ000000000	SAMN15784223	NIOZ-UU147	Rhodospirillaceae bacterium
GCA_014383745.1	JACNHE000000000	SAMN15784218	NIOZ-UU142	Rhodospirillaceae bacterium
GCA_014382365.1	JACNJW000000000	SAMN15784288	NIOZ-UU44	SAR324 cluster bacterium
GCA_014381325.1	JACNLX000000000	SAMN15784342	NIOZ-UU93	SAR86 cluster bacterium
GCA_014381985.1	JACNKP000000000	SAMN15784308	NIOZ-UU62	SAR92 clade bacterium
GCA_014383845.1	JACNGZ000000000	SAMN15784213	NIOZ-UU138	Spirochaetota bacterium
GCA_014383055.1	JACNIM000000000	SAMN15784252	NIOZ-UU175	Synechococcus sp.
GCA_014381295.1	JACNLY000000000	SAMN15784343	NIOZ-UU94	Synechococcus sp.
GCA_014381205.1	JACNMB000000000	SAMN15784346	NIOZ-UU97	Verrucomicrobiaceae bacterium
GCA_014383315.1	JACNIB000000000	SAMN15784241	NIOZ-UU165	Verrucomicrobiota bacterium
GCA_014382645.1	JACNJI000000000	SAMN15784274	NIOZ-UU31	Verrucomicrobiota bacterium
GCA_014382705.1	JACNJE000000000	SAMN15784270	NIOZ-UU28	Verrucomicrobiota bacterium
GCA_014384455.1	JACNFW000000000	SAMN15784184	NIOZ-UU111	archaeon
GCA_014383305.1	JACNHZ000000000	SAMN15784239	NIOZ-UU163	archaeon
GCA_014383225.1	JACNIF000000000	SAMN15784245	NIOZ-UU169	bacterium
GCA_014383165.1	JACNII000000000	SAMN15784248	NIOZ-UU171	bacterium
GCA_014383145.1	JACNIJ000000000	SAMN15784249	NIOZ-UU172	bacterium
GCA_014383415.1	JACNHT000000000	SAMN15784233	NIOZ-UU156	bacterium
GCA_014382975.1	JACNIR000000000	SAMN15784257	NIOZ-UU18	bacterium
GCA_014383025.1	JACNIQ000000000	SAMN15784256	NIOZ-UU179	bacterium
GCA_014384545.1	JACNFQ000000000	SAMN15784178	NIOZ-UU106	bacterium
GCA_014383695.1	JACNHH000000000	SAMN15784221	NIOZ-UU145	bacterium
GCA_014383985.1	JACNGT000000000	SAMN15784207	NIOZ-UU132	bacterium
GCA_014384185.1	JACNGL000000000	SAMN15784199	NIOZ-UU125	bacterium
GCA_014384045.1	JACNGR000000000	SAMN15784205	NIOZ-UU130	bacterium
GCA_014381605.1	JACNLI000000000	SAMN15784327	NIOZ-UU8	bacterium
GCA_014382155.1	JACNKH000000000	SAMN15784300	NIOZ-UU55	bacterium
GCA_014382085.1	JACNKJ000000000	SAMN15784302	NIOZ-UU57	bacterium
GCA_014381395.1	JACNLT000000000	SAMN15784338	NIOZ-UU9	candidate division KSB1 bacterium
GCA_014874595.1	JACKQG000000000	SAMN15677084	-	marine metagenome

SRA Data Details

Parameter	Value
Data volume, Gbases	21
Data volume, Mbytes	12966

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marine metagenome

Metagenomic sequencing of the Black Sea water column

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