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Accession: PRJNA643587 ID: 643587

Genomic sequencing of Clostridium botulinum

Genomic sequencing of Clostridium botulinum. This project is to sequence the genomes of >100 Clostridium botulinum which is a food pathogen to investigate the pathogenecity and evolution of multiple strains.
AccessionPRJNA643587
Data TypeGenome sequencing and assembly
ScopeMultispecies
SubmissionRegistration date: 1-Jul-2020
Illinois Institute of Technology
RelevanceMedical
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)108
Other datasets
BioSample108
Assembly108
Assembly details:
Assembly levelNumber of Assemblies
108
108
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_019923775.1ContigJACBNC000000000SAMN15420554
NFL
GCA_019923815.1ContigJACBND000000000SAMN15420532
FDA
GCA_019923765.1ContigJACBNB000000000SAMN15420565
UW
GCA_019923865.1ContigJACBNF000000000SAMN15420485
1961-4
GCA_019923845.1ContigJACBNE000000000SAMN15420518
campbell
GCA_019839135.1ContigJACBEU000000000SAMN15420464
DFPST0026
GCA_019839125.1ContigJACBET000000000SAMN15420465
DFPST0027
GCA_019839095.1ContigJACBES000000000SAMN15420466
DFPST0028
GCA_019839085.1ContigJACBER000000000SAMN15420467
DFPST0029
GCA_019839065.1ContigJACBEQ000000000SAMN15420468
DFPST0031
GCA_019839045.1ContigJACBEP000000000SAMN15420469
DFPST0032
GCA_019839025.1ContigJACBEO000000000SAMN15420470
2015006187-DFPST
GCA_019838985.1ContigJACBEN000000000SAMN15420471
2015006204-DFPST
GCA_019838995.1ContigJACBEJ000000000SAMN15420475
KM69-1-070E
GCA_019838965.1ContigJACBEK000000000SAMN15420474
DFPST0018
GCA_019838945.1ContigJACBEI000000000SAMN15420476
KM70-1-1304E
GCA_019838925.1ContigJACBED000000000SAMN15420481
DFPST0048
GCA_019838905.1ContigJACBEE000000000SAMN15420480
DFPST0044
GCA_019837835.1ContigJACBCI000000000SAMN15420530
DFPST0013
GCA_019837805.1ContigJACBCH000000000SAMN15420531
KM46
GCA_019837765.1ContigJACBCE000000000SAMN15420535
GiorgioA-KM21-1
GCA_019837775.1ContigJACBCF000000000SAMN15420534
DFPST009
GCA_019837745.1ContigJACBCG000000000SAMN15420533
Gav79A-KM63-1
GCA_019837685.1ContigJACBCD000000000SAMN15420536
KM64
GCA_019837645.1ContigJACBCC000000000SAMN15420537
GS1342-KM11-1
GCA_019839195.1ContigJACBEV000000000SAMN15420463
DFPST0025
GCA_019839185.1ContigJACBEW000000000SAMN15420462
DFPST0024
GCA_019838025.1ContigJACBCN000000000SAMN15420525
CJ5-1
GCA_019838005.1ContigJACBCM000000000SAMN15420526
ClovisA-KM10-1
GCA_019837985.1ContigJACBCJ000000000SAMN15420529
DFPST0040
GCA_019837895.1ContigJACBCK000000000SAMN15420528
DFPST008
GCA_019837865.1ContigJACBCL000000000SAMN15420527
CSI-A-KM45-1
GCA_019838865.1ContigJACBEC000000000SAMN15420482
DFPST0014
GCA_019838845.1ContigJACBEB000000000SAMN15420483
DFPST0045
GCA_019838825.1ContigJACBDZ000000000SAMN15420486
2015006193-DFPST
GCA_019838805.1ContigJACBDY000000000SAMN15420487
2015006195-DFPST
GCA_019838785.1ContigJACBDX000000000SAMN15420488
KM89-1-202F
GCA_019838765.1ContigJACBDW000000000SAMN15420489
DFPST004
GCA_019838745.1ContigJACBDV000000000SAMN15420490
DFPST0020
GCA_019838725.1ContigJACBDU000000000SAMN15420491
DFPST0042
GCA_019838705.1ContigJACBDT000000000SAMN15420492
KM52-1-383B
GCA_019838685.1ContigJACBDQ000000000SAMN15420495
4896A-KM32-1
GCA_019838665.1ContigJACBDS000000000SAMN15420493
429A-KM18-1
GCA_019838645.1ContigJACBDR000000000SAMN15420494
430A-KM58-1
GCA_019838625.1ContigJACBDP000000000SAMN15420496
62-A-KM138-1
GCA_019838605.1ContigJACBDL000000000SAMN15420500
69-A-KM145-1
GCA_019838585.1ContigJACBDO000000000SAMN15420497
KM53
GCA_019838565.1ContigJACBDJ000000000SAMN15420502
73A-KM33-1
GCA_019838545.1ContigJACBDI000000000SAMN15420503
78A-KM34-1
GCA_019838495.1ContigJACBDG000000000SAMN15420505
KM90-1-8G-F
GCA_019838515.1ContigJACBDH000000000SAMN15420504
KM71
GCA_019838485.1ContigJACBDF000000000SAMN15420506
KM87-1-86F
GCA_019838465.1ContigJACBDC000000000SAMN15420509
KM126
GCA_019838425.1ContigJACBDE000000000SAMN15420507
97A-KM35-1
GCA_019838385.1ContigJACBDA000000000SAMN15420511
KM125-1-BelugaE
GCA_019838345.1ContigJACBCZ000000000SAMN15420512
BirminghamE-KM30-1
GCA_019838305.1ContigJACBDB000000000SAMN15420510
BelgiumE-KM72-1
GCA_019838285.1ContigJACBCV000000000SAMN15420516
Cam3A-KM20-1
GCA_019838295.1ContigJACBCY000000000SAMN15420513
BS-A-KM7-1
GCA_019838265.1ContigJACBCW000000000SAMN15420515
Cam2A-KM19-1
GCA_019838245.1ContigJACBCT000000000SAMN15420519
Cbot23-KM43-1
GCA_019838225.1ContigJACBCX000000000SAMN15420514
Cam11A-KM36-1
GCA_019838165.1ContigJACBCR000000000SAMN15420521
CC4A-KM61-1
GCA_019838125.1ContigJACBCO000000000SAMN15420524
CJ4-1
GCA_019838095.1ContigJACBCQ000000000SAMN15420522
CDC-CR2
GCA_019838085.1ContigJACBCS000000000SAMN15420520
CC1-A-KM44-1
GCA_019838045.1ContigJACBCP000000000SAMN15420523
ChCh9A-KM62-1
GCA_019836905.1ContigJACBCA000000000SAMN15420539
KM75-1-IsvE
GCA_019836885.1ContigJACBCB000000000SAMN15420538
Igr7E-KM74-1
GCA_019836865.1ContigJACBBY000000000SAMN15420541
JP6-A-KM22-1
GCA_019836845.1ContigJACBBZ000000000SAMN15420540
KM91-1-IwanaiiE
GCA_019836795.1ContigJACBBX000000000SAMN15420542
KM127-1-Kalamazoo
GCA_019836805.1ContigJACBBW000000000SAMN15420543
DFPST0019
GCA_019836785.1ContigJACBBU000000000SAMN15420545
KM77
GCA_019836765.1ContigJACBBT000000000SAMN15420546
DFPST0043
GCA_019836745.1ContigJACBBV000000000SAMN15420544
DFPST010
GCA_019836715.1ContigJACBBS000000000SAMN15420547
KM28
GCA_019836705.1ContigJACBBQ000000000SAMN15420549
Masc1A-KM47-1
GCA_019836685.1ContigJACBBR000000000SAMN15420548
KM65-1-Kingtn1A
GCA_019836665.1ContigJACBBP000000000SAMN15420550
KM124
GCA_019836645.1ContigJACBBM000000000SAMN15420553
KM84
GCA_019836625.1ContigJACBBK000000000SAMN15420556
KM88-1-PC-F
GCA_019836605.1ContigJACBBL000000000SAMN15420555
OSA3-A-KM38-1
GCA_019836585.1ContigJACBBJ000000000SAMN15420557
DFPST0015
GCA_019836565.1ContigJACBBI000000000SAMN15420558
RS700A-KM13-1
GCA_019836545.1ContigJACBBH000000000SAMN15420559
KM66-1-Skor2A
GCA_019836515.1ContigJACBBG000000000SAMN15420560
KM67-1-Skor3A
GCA_019836495.1ContigJACBBF000000000SAMN15420561
KM57-1-TJ980B
GCA_019836485.1ContigJACBBE000000000SAMN15420562
DFPST0033
GCA_019836465.1ContigJACBBB000000000SAMN15420566
KM123
GCA_019836435.1ContigJACBBD000000000SAMN15420563
TJI-A-KM39-1
GCA_019836405.1ContigJACBBA000000000SAMN15420567
KM78-1-VHE
GCA_014805305.1ContigJACBEM000000000SAMN15420472
2015006229-DFPST
GCA_014805275.1ContigJACBEH000000000SAMN15420477
DFPST0017
GCA_014805255.1ContigJACBEL000000000SAMN15420473
DFSPT001
GCA_014805235.1ContigJACBDN000000000SAMN15420498
KM25
GCA_014805215.1ContigJACBEF000000000SAMN15420479
DFPST003
GCA_014805195.1ContigJACBEG000000000SAMN15420478
DFPST002
GCA_014805185.1ContigJACBDK000000000SAMN15420501
DFPST0006
GCA_014805165.1ContigJACBDM000000000SAMN15420499
DFPST005
GCA_014805145.1ContigJACBBO000000000SAMN15420551
DFPST0016
GCA_014805105.1ContigJACBBN000000000SAMN15420552
DFPST011
GCA_014805095.1ContigJACBDD000000000SAMN15420508
DFPST007
GCA_014805085.1ContigJACBCU000000000SAMN15420517
DFPST0041
GCA_014805065.1ContigJACBBC000000000SAMN15420564
DFPST012
GCA_019839165.1ContigJACBEX000000000SAMN15420461
2007
GCA_019838855.1ContigJACBEA000000000SAMN15420484
1961-2
GCA_019839225.1ContigJACBEY000000000SAMN15420460
1990

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