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Accession: PRJNA613702 ID: 613702

Time-lapse RNA-seq analysis to study transcriptional regulation by early signals in De Novo Root Regeneration in Arabidopsis (thale cress)

See Genome Information for Arabidopsis thaliana
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7326 additional projects are related by organism.
Detached Arabidopsis leaves can regenerate adventitious roots, providing a platform to study de novo root regeneration (DNRR). More...
AccessionPRJNA613702; GEO: GSE147301
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismArabidopsis thaliana[Taxonomy ID: 3702]
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis; Arabidopsis thaliana
PublicationsLiu W et al., "Transcriptional landscapes of de novo root regeneration from detached Arabidopsis leaves revealed by time-lapse and single-cell RNA sequencing analyses.", Plant Commun, 2022 Jul 11;3(4):100306
SubmissionRegistration date: 20-Mar-2020
Chinese Academy of Sciences, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences
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RelevanceModel Organism
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments24
Publications
PubMed1
PMC1
Other datasets
BioSample24
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes2
SRA Data Details
ParameterValue
Data volume, Gbases295
Data volume, Mbytes92494

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