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Accession: PRJNA612507 ID: 612507

freshwater metagenome

Genomes of bloom-forming freshwater cyanobacteria Dolichospermum sp., Aphanizomenon flos-aquae, Gloeotrichia sp.and bloom-associated heterotrophic bacteria

Cyanobacterial blooms are an increasing scourge in freshwater lakes and reservoirs across the world. More...
AccessionPRJNA612507
Data TypeGenome sequencing and assembly
ScopeEnvironment
Organismfreshwater metagenome[Taxonomy ID: 449393]
unclassified sequences; metagenomes; ecological metagenomes; freshwater metagenome
PublicationsDreher TW et al., "Complete genomes derived by directly sequencing freshwater bloom populations emphasize the significance of the genus level ADA clade within the Nostocales.", Harmful Algae, 2021 Mar;103:102005
SubmissionRegistration date: 12-Mar-2021
Oregon State University
RelevanceEnvironmental
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)31
WGS master22
Genomic DNA9
SRA Experiments1
Protein Sequences44683
Publications
PubMed1
Other datasets
BioSample65
Assembly31
Assembly details:
Assembly levelNumber of Assemblies
9
6
16
31
AssemblyLevelWGSChrsBioSampleIsolateTaxonomy
GCA_023910665.1ContigJAAVWB000000000
SAMN14509310
UKL202b
GCA_017355725.1ContigJAAVWA000000000
SAMN14448381
54
GCA_017346875.1Complete genomeSAMN14448365
KM1D3_PB
GCA_017346855.1Complete genomeSAMN14448357
DEX188
GCA_017355665.1ContigJABGCF000000000
SAMN14448359
CP01
GCA_024036395.1ChromosomeJACGCO000000000
SAMN14448366
AFA_KM1/D3a
GCA_023910605.1ContigJAAVVV000000000
SAMN14448361
CP01b
GCA_025370075.1Complete genomeSAMN18679156
WA131a
GCA_024998765.1ContigJACEUV000000000
SAMN15194753
OL02
GCA_018447705.1ChromosomeJACGCP000000000
SAMN14448369
BR01
GCA_017355625.1ContigJAAVVX000000000
SAMN14448370
DET73
GCA_017355645.1ContigJAAVVT000000000
SAMN14448355
DEX182a
GCA_017355655.1ContigJAAVVU000000000
SAMN14448358
DEX189
GCA_017346835.1Complete genomeSAMN14448371
DL01
GCA_017355635.1ContigJAAVVY000000000
SAMN14448372
JUN01
GCA_017346815.1Complete genomeSAMN14448374
LBC05a
GCA_018447755.1ChromosomeJACGCQ000000000
SAMN14448375
OL01
GCA_024036375.1ChromosomeJACGCR000000000
SAMN14448376
OL03
GCA_017346795.1Complete genomeSAMN14448353
UKL201
GCA_018447775.1ChromosomeJACGCS000000000
SAMN14448378
WA123
GCA_023910675.1ContigJAAVWC000000000
SAMN14509311
UKL202c
GCA_023657325.1ContigJAGTJV000000000
SAMN18685713
DEX184
GCA_038087035.1Complete genomeSAMN14448364
CP02
GCA_038087005.1Complete genomeSAMN14448380
IR180
GCA_023657425.1ContigJAGTJW000000000
SAMN18679157
WA131b
GCA_023910625.1ContigJAAVVW000000000
SAMN14448362
CP01c
GCA_022184905.1ChromosomeJAGTJT000000000
SAMN18685712
WC205
GCA_023657465.1ContigJAGTJX000000000
SAMN18679158
WA131c
GCA_022184915.1ContigJAGTJU000000000
SAMN18679184
WC205a
GCA_023910635.1ContigJAAVVZ000000000
SAMN14448379
WA123a
GCA_025370055.1Complete genomeSAMN18685711
WA131
SRA Data Details
ParameterValue
Data volume, Gbases1
Data volume, Mbytes433

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