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Accession: PRJNA574489 ID: 574489

Bacteria

Genome sequencing of bacterial strains involved in meat spoilage.

See Genome Information for Clostridium estertheticum
Various species of bacteria have been isolated and selected for genome sequencing to examine their role in blown pack spoilage (BPS) of uncooked vacuum packed meat products.
AccessionPRJNA574489
Data TypeGenome sequencing and assembly
ScopeMultispecies
Publications (total 10)
  • Palevich F et al., "Multiple genome sequences of lactic acid bacteria, Carnobacterium divergens and Carnobacterium maltaromaticum strains, isolated from vacuum-packaged lamb meat.", Microbiol Resour Announc, 2024 Feb 15;13(2):e0105823
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SubmissionRegistration date: 9-Oct-2019
AgResearch
Related Resources
RelevanceIndustrial
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (WGS master)53
SRA Experiments52
Publications
PubMed9
PMC8
Other datasets
BioSample53
Assembly53
Assembly details:
Assembly levelNumber of Assemblies
53
53
AssemblyLevelWGSBioSampleStrainTaxonomy
GCA_031921285.1ContigJALRNB000000000SAMN27571592
9-68
GCA_031921365.1ContigJALRNA000000000SAMN27571591
9-12
GCA_031921565.1ContigJALRMP000000000SAMN27571580
9-13
GCA_031921545.1ContigJALRMS000000000SAMN27571583
9-47
GCA_031921525.1ContigJALRMQ000000000SAMN27571581
9-8
GCA_031921505.1ContigJALRMT000000000SAMN27571584
9-48
GCA_031921485.1ContigJALRMR000000000SAMN27571582
9-14
GCA_031921465.1ContigJALRMU000000000SAMN27571585
9-49
GCA_031921445.1ContigJALRMW000000000SAMN27571587
9-70
GCA_031921425.1ContigJALRMY000000000SAMN27571589
12-22
GCA_031921405.1ContigJALRMV000000000SAMN27571586
9-69
GCA_030500595.1ContigJAMLGB000000000SAMN28613653
NZRM 3572
GCA_031921385.1ContigJALRMX000000000SAMN27571588
12-15
GCA_031921325.1ContigJALRMZ000000000SAMN27571590
12-25
GCA_020176155.1ContigJAIRAZ000000000SAMN21245816
DSM 14206
GCA_011065935.2ContigJAAMNH000000000SAMN14128651
FP3
GCA_008933175.2ContigWBOE00000000SAMN12859418
DSM 14864
GCA_011065905.2ContigJAAMNG000000000SAMN14128652
FP4
GCA_011065975.2ContigJAAMNJ000000000SAMN14128649
FP1
GCA_011065955.2ContigJAAMNI000000000SAMN14128650
FP2
GCA_011065855.2ContigJAAMNF000000000SAMN14128653
M14
GCA_025653605.1ContigJAKKSD000000000SAMN25232830
SM91
GCA_025653895.1ContigJAKKSA000000000SAMN25232827
SM77
GCA_025397935.1ContigJALOCN000000000SAMN27561646
DSM 50426
GCA_025654465.1ContigJAKKRH000000000SAMN25232809
SM101
GCA_025654455.1ContigJAKKRI000000000SAMN25232808
SM102
GCA_025654415.1ContigJAKKRJ000000000SAMN25232810
SM103
GCA_025654545.1ContigJAKKRK000000000SAMN25232811
SM20
GCA_025654335.1ContigJAKKRL000000000SAMN25232812
SM21
GCA_025654295.1ContigJAKKRM000000000SAMN25232813
SM23
GCA_025654245.1ContigJAKKRN000000000SAMN25232814
SM29
GCA_025654235.1ContigJAKKRO000000000SAMN25232815
SM32
GCA_025654175.1ContigJAKKRP000000000SAMN25232816
SM34
GCA_025654105.1ContigJAKKRQ000000000SAMN25232817
SM35
GCA_025654095.1ContigJAKKRR000000000SAMN25232818
SM43
GCA_025654025.1ContigJAKKRS000000000SAMN25232819
SM55
GCA_025654015.1ContigJAKKRT000000000SAMN25232820
SM65
GCA_025653925.1ContigJAKKRU000000000SAMN25232821
SM68
GCA_025653985.1ContigJAKKRV000000000SAMN25232822
SM69
GCA_025653905.1ContigJAKKRW000000000SAMN25232823
SM71
GCA_025653775.1ContigJAKKRX000000000SAMN25232824
SM72
GCA_025653795.1ContigJAKKRY000000000SAMN25232825
SM73
GCA_025653725.1ContigJAKKRZ000000000SAMN25232826
SM74
GCA_025653535.1ContigJAKKSB000000000SAMN25232828
SM78
GCA_025653705.1ContigJAKKSC000000000SAMN25232829
SM87
GCA_025653595.1ContigJAKKSE000000000SAMN25232831
SM95
GCA_025653355.1ContigJAKKSF000000000SAMN25232832
SM96
GCA_025653545.1ContigJAKKSG000000000SAMN25232833
SW1
GCA_025653395.1ContigJAKKSH000000000SAMN25232834
SW24
GCA_025653375.1ContigJAKKSI000000000SAMN25232835
SW29
GCA_025653365.1ContigJAKKSJ000000000SAMN25232836
SW32
GCA_025653415.1ContigJAKKSK000000000SAMN25232837
SW36
GCA_030281045.1ContigJAMLGA000000000SAMN28613652
NZRM 825
SRA Data Details
ParameterValue
Data volume, Gbases26
Data volume, Mbytes13048

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