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Accession: PRJNA561292 ID: 561292

Transcriptomic profiles of Pseudomonas aeruginosa PAO1 grown in the presence or absence of mucins or mucin-glycans

See Genome Information for Pseudomonas aeruginosa
We use high-throughput sequencing to profile the response of the opportunistic mucosal pathogen Pseudomonas aeruginosa to mucins and mucin-glycans from the mucosal niche. More...
AccessionPRJNA561292; GEO: GSE136097
Data TypeTranscriptome or Gene expression
ScopeMultiisolate
OrganismPseudomonas aeruginosa[Taxonomy ID: 287]
Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa
PublicationsWheeler KM et al., "Mucin glycans attenuate the virulence of Pseudomonas aeruginosa in infection.", Nat Microbiol, 2019 Dec;4(12):2146-2154
SubmissionRegistration date: 21-Aug-2019
Ribbeck, Biological Engineering, Massachusetts Institute of Technology
RelevanceEnvironmental
Project Data:
Resource NameNumber
of Links
Sequence data
SRA Experiments15
Publications
PubMed1
PMC1
Other datasets
BioSample15
GEO DataSets1
GEO Data Details
ParameterValue
Data volume, Supplementary Mbytes1
SRA Data Details
ParameterValue
Data volume, Gbases12
Data volume, Mbytes6789

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