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Accession: PRJNA51443 ID: 51443

Human Vaginal Microbiome

The Vaginal Microbiome: Disease, Genetics and the Environment - Demonstration project for Human Microbiome Project (HMP)

AccessionPRJNA51443
TypeUmbrella Metagenome project (Subtype:Metagenome)
Organismhuman metagenome[Taxonomy ID: 646099]
unclassified sequences; metagenomes; organismal metagenomes; human metagenome
SubmissionRegistration date: 11-Aug-2010
Virginia Commonwealth University
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)2013
WGS master16
Genomic DNA4
SRA Experiments10571
Protein Sequences18984
Publications
PubMed4
PMC4
Other datasets
BioSample6548
Genotype and Phenotype (dbGaP)1
Assembly20
SRA Data Details
ParameterValue
Data volume, Gbases186
Data volume, Tbytes0.24
Human Vaginal Microbiome encompasses the following 64 sub-projects:
Project TypeNumber of Projects
Genome sequencing

3
1
1
2
50
6
63
BioProject
accession
Assembly
level
OrganismTitle
PRJNA50155 SRA or TraceAerococcus sp. EX336960VC24Demonstration Project Reference Genome for Human Microbiome Project (Virginia Commonwealth University)
PRJNA50143 SRA or TraceBifidobacterium breve EX336960VC18Demonstration Project Reference Genome for Human Microbiome Project (Virginia Commonwealth University)
PRJNA50145 SRA or TraceBifidobacterium breve EX336960VC19Demonstration Project Reference Genome for Human Microbiome Project (Virginia Commonwealth University)
PRJNA50149 SRA or TraceBifidobacterium breve EX336960VC21Demonstration Project Reference Genome for Human Microbiome Project (Virginia Commonwealth University)
PRJNA50121 SRA or TraceBifidobacterium breve EX533959VC21Demonstration Project Reference Genome for Human Microbiome Project (Virginia Commonwealth University)
List all 63 'Genome sequencing' projects...
Phenotype or Genotype1
BioProject
accession
OrganismTitle
PRJNA46311human metagenomeThe Vaginal Microbiome: Disease, Genetics and the Environment (Virginia Commonwealth University)

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    The Vaginal Microbiome: Disease, Genetics and the Environment - Demonstration project for Human Microbiome Project (HMP)
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