Study of the human skin microbiome associated with... (ID 51439) - BioProject

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Accession: PRJNA51439 ID: 51439

Study of the human skin microbiome associated with acne

Accession	PRJNA51439
Type	Umbrella Metagenome project (Subtype:Metagenome)
Organism	human skin metagenome[Taxonomy ID: 539655] unclassified sequences; metagenomes; organismal metagenomes; human skin metagenome
Submission	Registration date: 11-Aug-2010 University of California Los Angeles

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	5111
WGS master	73
Genomic DNA	2
SRA Experiments	209
Capillary Traces (Trace Archive)	1
Protein Sequences	188504
Publications
PubMed	3
PMC	3
Other datasets
BioSample	300
Genotype and Phenotype (dbGaP)	1
Assembly	74

Parameter	Value
Data volume, Gbases	33
Data volume, Mbytes	26487

Study of the human skin microbiome associated with acne encompasses the following 72 sub-projects:

Project Type

Number of Projects

Genome sequencing

Highest level of assembly :

1
65
4
1
71

BioProject accession	Assembly level	Name	Title
PRJNA247994	Contigs	Cutibacterium acnes	Propionibacterium acnes Genome sequencing (University of California,...)
PRJNA247997	Contigs	Cutibacterium acnes	Cutibacterium acnes strain:HL411PA1 Genome sequencing and assembly (University of California,...)
PRJNA49245	Scaffolds	Cutibacterium acnes HL001PA1	Demonstration Project Reference Genome for Human Microbiome Project (Genome Sequencing Center...)
PRJNA49265	Scaffolds	Cutibacterium acnes HL002PA1	Demonstration Project Reference Genome for Human Microbiome Project (Genome Sequencing Center...)
PRJNA49267	Scaffolds	Cutibacterium acnes HL002PA2	Demonstration Project Reference Genome for Human Microbiome Project (Genome Sequencing Center...)

Phenotype or Genotype

BioProject accession	Organism	Title
PRJNA46327	human metagenome	Metagenomic study of the human skin microbiome associated with acne (University of California...)