human gut metagenome (ID 508395) - BioProject

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Accession: PRJNA508395 ID: 508395

human gut metagenome

Long read sequencing assembly of three healthy human gut microbiome samples, with multiple closed bacterial genomes including Prevotella copri.

Accession	PRJNA508395
Data Type	Genome sequencing and assembly
Scope	Environment
Organism	human gut metagenome[Taxonomy ID: 408170] unclassified sequences; metagenomes; organismal metagenomes; human gut metagenome
Publications	Moss EL et al., "Complete, closed bacterial genomes from microbiomes using nanopore sequencing.", Nat Biotechnol, 2020 Jun;38(6):701-707
Submission	Registration date: 10-Dec-2019 Stanford University
Relevance	Medical

Project Data:

Assembly level

Number of Assemblies

23
23

Assembly	WGS	BioSample	Isolate	Taxonomy
GCA_009739415.1	SCPE00000000	SAMN10723575	P1-1	Alistipes sp.
GCA_009739405.1	SCPF00000000	SAMN10723576	P1-2	Bacteroides uniformis
GCA_009739355.1	SCPI00000000	SAMN10723579	P2A-1	Dialister invisus
GCA_009739395.1	SCPG00000000	SAMN10723577	P1-3	Oscillibacter sp.
GCA_009739295.1	SCPJ00000000	SAMN10723580	P2A-2	Phascolarctobacterium sp.
GCA_009739285.1	SCPL00000000	SAMN10723582	P2B-1	Phascolarctobacterium sp.
GCA_009739345.1	SCPM00000000	SAMN10723583	P2B-2	Segatella copri
GCA_009739305.1	SCPK00000000	SAMN10723581	P2A-3	Segatella copri
GCA_009739385.1	SCPH00000000	SAMN10723578	P1-4	Subdoligranulum sp.
GCA_011075405.1	SCPN00000000	SAMN10720447	-	human gut metagenome
GCA_011075415.1	SCPO00000000	SAMN10720448	-	human gut metagenome
GCA_011075385.1	SCPP00000000	SAMN10720449	-	human gut metagenome
GCA_009741575.1	VOFD00000000	SAMN12384723	-	human gut metagenome
GCA_009741525.1	VOFH00000000	SAMN12384727	-	human gut metagenome
GCA_009741515.1	VOFJ00000000	SAMN12384729	-	human gut metagenome
GCA_009741535.1	VOFE00000000	SAMN12384724	-	human gut metagenome
GCA_009741495.1	VOFF00000000	SAMN12384725	-	human gut metagenome
GCA_009741625.1	VOFG00000000	SAMN12384726	-	human gut metagenome
GCA_009741595.1	VOFC00000000	SAMN12384722	-	human gut metagenome
GCA_009741695.1	VOFB00000000	SAMN12384721	-	human gut metagenome
GCA_009741665.1	VOFI00000000	SAMN12384728	-	human gut metagenome
GCA_009741655.1	VOFK00000000	SAMN12384730	-	human gut metagenome
GCA_009741615.1	VOFL00000000	SAMN12384731	-	synthetic metagenome

Parameter	Value
Data volume, Gbases	235
Data volume, Tbytes	0.20