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Accession: PRJNA474939 ID: 474939

Drosophila miranda strain:MSH22

Drosophila miranda strain:MSH22 Genome sequencing and assembly

See Genome Information for Drosophila miranda
Genome assembly of Drosophila miranda MSH22 male
AccessionPRJNA474939
Data TypeGenome sequencing and assembly
ScopeMonoisolate
OrganismDrosophila miranda[Taxonomy ID: 7229]
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora; Drosophila miranda
PublicationsMahajan S et al., "De novo assembly of a young Drosophila Y chromosome using single-molecule sequencing and chromatin conformation capture.", PLoS Biol, 2018 Jul;16(7):e2006348
Grants
  • "Dosage compensation and the rewiring of regulatory netoworks in Drosophila" (Grant ID R01 GM076007, National Institute of General Medical Sciences)
  • "Comparative genomics of sex chromosomes in Diptera: gene trafficking, dosage comp" (Grant ID R01 GM093182, National Institute of General Medical Sciences)
  • "The formation of Heterochromatin on evolving Y chromosomes" (Grant ID R01 GM101255, National Institute of General Medical Sciences)
SubmissionRegistration date: 10-Aug-2018
Bachtrog Lab, UC Berkeley
RelevanceEvolution
Locus Tag PrefixDNE19
Project Data:
Resource NameNumber
of Links
Sequence data
Nucleotide (total)7
WGS master1
Publications
PubMed1
PMC1
Other datasets
BioSample1
Assembly1
Related RefSeq Project
PRJNA623594 : Drosophila miranda strain:MSH22 RefSeq Genome sequencing

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