Escherichia coli MS 182-1 (ID 47265) - BioProject

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Accession: PRJNA47265 ID: 47265

Escherichia coli MS 182-1

Demonstration Project Reference Genome for Human Microbiome Project

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This project is a component of the Genomes of microorganisms that have been isolated in and on the human body, to be used as Reference Genomes for the Human Microbiome Project (HMP)

This project is a component of the Effect of Crohn's Disease Risk Alleles on Enteric Microbiota - Demonstration project for Human Microbiome Project (HMP)

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9053 additional projects are related by organism.

2947 additional projects are components of the Genomes of microorganisms that have been isolated in and on the human body, to be used as Reference Genomes for the Human Microbiome Project (HMP).

28 additional projects are components of the Effect of Crohn's Disease Risk Alleles on Enteric Microbiota - Demonstration project for Human Microbiome Project (HMP).

This strain is being sequenced as a reference for the Demonstration Project "Effect of Crohn's Disease Risk Alleles on Enteric Microbiota" of the Human Microbiome Project (HMP).

Accession	PRJNA47265
Data Type	Genome sequencing and assembly
Scope	Monoisolate
Organism	Escherichia coli MS 182-1[Taxonomy ID: 749545] Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia coli; Escherichia coli MS 182-1
Submission	Registration date: 21-May-2010 Genome Sequencing Center (GSC) at Washington University (WashU) School of Medicine
Locus Tag Prefix	HMPREF9548

Project Data:

Resource Name	Number of Links
Sequence data
Nucleotide (total)	627
WGS master	1
SRA Experiments	1
Protein Sequences	5317
Other datasets
BioSample	1
Assembly	1

Assembly details:

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Assembly	Level	WGS	BioSample	Taxonomy
GCA_000164255.1	Scaffold	ADTM00000000	SAMN00189174	Escherichia coli MS 182-1

SRA Data Details

Parameter	Value
Data volume, Gbases	1
Data volume, Mbytes	253

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LinkOut to external resources

GOLD: Gp0001368 [Genomes On Line Database]
GOLD: Gp0001368
Genomes On Line Database
648276656: Escherichia coli MS 182-1 [Integrated Microbial Genomes]
648276656: Escherichia coli MS 182-1
Integrated Microbial Genomes
SILVA SSU Database [SILVA]
SILVA SSU Database
SILVA

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